| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0820 |
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| Symbol | |
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| ID | 6282317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 908970 |
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| End bp | 911204 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620383 |
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| Product | exopolysaccharide transport protein family |
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| Protein accession | YP_001894466 |
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| Protein GI | 187922824 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCA ACTTTGAAAA CCGTTACACC GACGTGTCCG GTCCGGACGA GCTTCACCTG
TCGGACTATC TGCGCACGAT CGTGCGAGGT TGGCGCACGA TCGTCGTGGT GACGCTGATC
GCGCTCGCGC TGGGGTGCGC GTACGCTTTC CTCGCGCCGC CGACGTACCG CGCGGATGTT
CTGTTTCATG TAGAGGACAA GACGGCGAAC GCCAATGCGA ACGGCAAGGA TTCCTTGCCG
CCGCTTACCG GCATGTTCGA CACCAAGCCT TCGACGGCGG CGGAGATCGA GTTGCTGAAG
TCGCGGCTCG TCACGGAAGA GACCGTCAAG AAGCTGCACC TCGATATCAC GGCTACGCCG
CGCTATTTTC CGGTTATCGG CGGAATGATC GCGGGGTTGG TGAACGGGCA ATGGGGCTTC
AAGTTGCCGC AGTTCATCAA CCTGTCCGGC TATGCATGGG GCGACGAGAG CATTTCGGTG
TCGCAGTTCG ATACGTCGAA GGAGATGTAC GACGCGACCT TCACGCTGGT TTCCGGAAAT
GACGGGTCGT ACGTGCTGCG GGACAAGAAC GGTATTGCGA TTCTGTCGGG GAAAGTCGGC
GAAACCGTGC AAACGGATAC CGCCGACGGC CCGATCACGC TGCGCGTCGA TAAGCTGGTC
GGCCCCGCCG GCTCGCGTTT CGAATTGCAG CGCGCCTCGA CACTGAGCAC CGTGGACCGT
CTGCAAAAGG CTTTGGTGGT GCAGGAAACC ACGCTGCAAT CCGGCGTGAT CCGCGCGAGT
CTGGAAGGCG GCGACGCCGG CCTGACGGCT GCGATCGTCA ACAGCATGGC GCGCGAGTTC
GTGCGTCAGG ACGTGGAGAG CCGTTCGACC GAAGCCGAGC ACATGCTGGC CTTCCTCGAT
CAGCAACTGC CGGGCTTGCG CAAGGAACTA GACGACGCCG AGCAACGCTA CAACAAGTTC
CGCAACACGC ACGGCACGGT CGACCTGGGC GAAGAAAGCC GCCTGCTGCT GCAACAGATC
GTCGATAACA AAACCAAGCT GATGGATCTG CAGCAGCAAC GCGCGGAGAT GTCGCAACGC
TTCACGGCGA ATCACCCGGC GGTGGCCGCG CTCGACGCGC AGATCGCCGC ATTGCAGGGC
GCGGCGGCCA ACATGAACCG CAGTGTGGCA GTGATGCCGG ACACGGAGCA GACCGCTTTG
CGTTTACTGC GCGACGTGCA CGTCGACACC GAGCTGTACA CCAATCTGCT GAACAGCGCG
CAGCAACTGC GCGTGGCGAA GGCGGGGCAG GTGGGCAACG TGCGCGTGGT CGACTTCGCC
GAAGCGCCTG ATGAACCGGT GCGGCCGAAG CGCGTGCTCG CGATCCTGAT CGCGCTCGGC
GGCGGCCTCG TGCTCGGCAT TCTGCTGACC TTCTTCAAGC GCGCGATGTA CGGCGGCGTG
GAACGCCCGG ACGAACTCGA AGGCATGCTC GGCGTGCCGG TATTCGCGGT GGTGCCGCGC
AGCCAGACGC AGTTGAAGCT GCAGGAAAAC GTCATGCTGC GCCGTCGCGG GCTGCATGTG
CTGGCCCAGC AGGCGCCGGA AGACATCGCC GTGGAAGGCG TGCGCAATCT GCGCACCTCG
TTGCAGCTCT CGCTCGATCA CGCGGAAAAC AACGTGGTGA TGATCACCGG CTCGCGGCCC
GATTCCGGCA AGTCGTTCCT GTCGGTGAAT CTGGCGGCGC TGGTGGCGTC GGCGAACAAG
CGCGTGCTGA TTATCGACGG CGACATGCGG CGCGGCGACG TGCACTCGCA TTTCGGTGTC
GCGCATCAGC CGGGTCTGTC CGACGTGCTG AGCGGCGGCG ATCTGGGCTC GATGATTCAG
CGCGACGTGC TGCCGGGTCT CGACGTGCTT GCCAAGGGCA CGCTGCCCTC GCATCCGGCC
GAACTGCTGA TGAGCAAACG CTTCGAAACG ATGCTCGAAG AACTGAAGGC GCATTACGAC
CTGGTGATCA TCGATACGCC GCCGGTTCTC GCGGTGACCG ACTCGACGGT GATCGGCAAG
TACGCGGGCA CGACGCTGCT GGTGGTGCGC CACGGCCGCC ATCCGCTCAA CGAAGTCATG
GAAACGGCCA AGCGGCTGCG CAATGGCGGC GTGGGGCTCC GAGGCGTTCT GTTGACCGAT
GTGCCGCAGG AAGGCGCGTT CCTCGGCTCG GGCTATCAGG GCGGCTACTA CGGCTACGAC
AGCATCGCCG GTTAA
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| Protein sequence | MAINFENRYT DVSGPDELHL SDYLRTIVRG WRTIVVVTLI ALALGCAYAF LAPPTYRADV
LFHVEDKTAN ANANGKDSLP PLTGMFDTKP STAAEIELLK SRLVTEETVK KLHLDITATP
RYFPVIGGMI AGLVNGQWGF KLPQFINLSG YAWGDESISV SQFDTSKEMY DATFTLVSGN
DGSYVLRDKN GIAILSGKVG ETVQTDTADG PITLRVDKLV GPAGSRFELQ RASTLSTVDR
LQKALVVQET TLQSGVIRAS LEGGDAGLTA AIVNSMAREF VRQDVESRST EAEHMLAFLD
QQLPGLRKEL DDAEQRYNKF RNTHGTVDLG EESRLLLQQI VDNKTKLMDL QQQRAEMSQR
FTANHPAVAA LDAQIAALQG AAANMNRSVA VMPDTEQTAL RLLRDVHVDT ELYTNLLNSA
QQLRVAKAGQ VGNVRVVDFA EAPDEPVRPK RVLAILIALG GGLVLGILLT FFKRAMYGGV
ERPDELEGML GVPVFAVVPR SQTQLKLQEN VMLRRRGLHV LAQQAPEDIA VEGVRNLRTS
LQLSLDHAEN NVVMITGSRP DSGKSFLSVN LAALVASANK RVLIIDGDMR RGDVHSHFGV
AHQPGLSDVL SGGDLGSMIQ RDVLPGLDVL AKGTLPSHPA ELLMSKRFET MLEELKAHYD
LVIIDTPPVL AVTDSTVIGK YAGTTLLVVR HGRHPLNEVM ETAKRLRNGG VGLRGVLLTD
VPQEGAFLGS GYQGGYYGYD SIAG
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