Gene Bphyt_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0804 
Symbol 
ID6283073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp886493 
End bp887134 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID642620367 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001894450 
Protein GI187922808 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CCAGTCTTTT CCTTACCGCC GCTGGCGTCG GCCTCGCGAT TGCCGCGCCG 
GTCGGCCCGA TGGGCATGCT GTGTATCCGC CGCACGCTGA CCGGCGGTCC GCGAGCGGGG
CTTGCCATCG GTTTCGGCAT CGCGACCGGC GACGCCGCCT ATGGTTTGAT CGCGGCGCTC
GGCCTCGTCA GCATCTCGCA GTTCATGCTC GCGTACGACC GGCCCTTGCA TCTGCTGGCC
GGGTTGTTCC TGTTGTATCT GGGGGTGCGC ACGCTGCTGC AGAAAGTGCC CGCCGATGCG
TCGACCGGCG AAGGCAACGG CAAGCTTGCG CAAGTGGGCC GCGCCGGCGC GCTGCGCGCG
TACGCGAGTT CCTTGCTGCT CACGCTGACC AATCCGCAAA CGGTCATCAT GTTCGCCGCG
CTGTTCACGA CGCTCGCCCC GCGCGGCGCG TTCTCATCGA GCATTGCGCT GACCACGGTC
GGCGGCGTGT TTTGCGGTTC GATCGCGTGG TGGTGTTTTC TCGTGACCGT GGTGTCGCTC
GCGCGTCATG CGATCGGCAG CAAACTGCGT GTGGCCATCG ACAAGATTGT CGGGTTCACG
CTGGCGGCGT TCGGCGTCGT GGAAATTCGC CGGGCGCTTT GA
 
Protein sequence
MSTTSLFLTA AGVGLAIAAP VGPMGMLCIR RTLTGGPRAG LAIGFGIATG DAAYGLIAAL 
GLVSISQFML AYDRPLHLLA GLFLLYLGVR TLLQKVPADA STGEGNGKLA QVGRAGALRA
YASSLLLTLT NPQTVIMFAA LFTTLAPRGA FSSSIALTTV GGVFCGSIAW WCFLVTVVSL
ARHAIGSKLR VAIDKIVGFT LAAFGVVEIR RAL