| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0783 |
|---|
| Symbol | |
|---|
| ID | 6283076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 861695 |
|---|
| End bp | 862855 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642620347 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001894430 |
|---|
| Protein GI | 187922788 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.724774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.275511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCA TCTTCACTCG CGATTTCCTC GCTTTGATCC TGAGCGTCGC CGTCGTCGGA
CTCGGCAGCG GCGCGACACT TCCCCTCACC GCCCTCGCGC TCACGCAAGC CGGTTACGGC
ACCGACGTCG TCGGCCTGCT GACCGCCGCG CAAGCGGGTG GCGGGCTCGT CATCGTGCCG
CTCGCGGGAT GGATTACCGC GCGTTTCGGC GGCCGCCAGG TGATCGTCGG CGCGGTGCTG
GTAGTGGCGT TCGCCACCGC GCTGATGCAG CTCACCTCGA ACCTGTGGCT GTGGGCCGTG
CTGCGCGTGC TGTGCGGCGC CGCGCTGATG CTCCTCTTCA CGATCGGCGA AGCCTGGGTC
AACCAGTTGG CCGACGACGC CACGCGCGGC CGCGTCATCG CTATTTACGC GACCAACTTC
ACGCTGTTCC AGATGGCCGG TCCGGTGCTG GTGAGTCAGA TTGCCGGCTT CGCGCAATGG
CGCTTCCTGA TTTGCGGCGC GATCTTCCTG CTGGCCCTGC CGATGCTCGC CACGATCCGC
AAGACCCCGC AAGCATCCGA GGATGAGCAC TCGGCGCACG GCAGTTGGCG TCGTGTTTTA
CCGCAGATGC CCGCGCTCGT GATCGGCACC GGCTTCTTCG CGTTGTTCGA CACGATCGCG
CTTTCGCTGC TGCCGCTCTT CGCCATGTCG CACGGCATGA CGAGCGAGGT GGCCGTGCTG
TTCGCGTCGG CGTTGTTGCT CGGCGATACG ACGATGCAAT TTCCGATTGG CTGGCTCGCC
GACCGGCTTG GACGGGAGCG CGTGCATATC GGTTGCGGTG TGGTCGTCGT GGCGCTGTTG
CCCTTGCTGC CGTGGGCGAT CGCCTCGCCG TGGCTGTGCT GGCCGCTGCT ATACGTGCTT
GGCGCGGCAG CCGGTGCGAT TTATACGCTG TCGCTGGTTG CCTGCGGCGA ACGCTTTCGC
GGTGTCGCAC TGGTGTCCGC GAGTTCGCTG GTGGGCGCCT CGTGGAGCGC GGCGAGTTTC
GGCGGCCCGC TGGTGGCTGG GGCGTTGATG AAGGGCGTCG GGAACGACGC GATGGTCGGC
GTGCTGCTCG TAGCTGCGTT GGCGTTTCTG GCGGCGGTTT GGTGGGAAAG ACGGCGCGCG
CCCGTGCGAG TCGCGGGTTG A
|
|---|
| Protein sequence | MKVIFTRDFL ALILSVAVVG LGSGATLPLT ALALTQAGYG TDVVGLLTAA QAGGGLVIVP
LAGWITARFG GRQVIVGAVL VVAFATALMQ LTSNLWLWAV LRVLCGAALM LLFTIGEAWV
NQLADDATRG RVIAIYATNF TLFQMAGPVL VSQIAGFAQW RFLICGAIFL LALPMLATIR
KTPQASEDEH SAHGSWRRVL PQMPALVIGT GFFALFDTIA LSLLPLFAMS HGMTSEVAVL
FASALLLGDT TMQFPIGWLA DRLGRERVHI GCGVVVVALL PLLPWAIASP WLCWPLLYVL
GAAAGAIYTL SLVACGERFR GVALVSASSL VGASWSAASF GGPLVAGALM KGVGNDAMVG
VLLVAALAFL AAVWWERRRA PVRVAG
|
|---|
| |