| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0778 |
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| Symbol | |
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| ID | 6283296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 854800 |
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| End bp | 855669 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642620342 |
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| Product | putative diguanylate phosphodiesterase |
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| Protein accession | YP_001894425 |
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| Protein GI | 187922783 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGC CTCACTACCG CCATCCATAC GCCTACATGA TTCCGCCGAC CATCCCCAAC
CTCATCGCCC GCTCCGCCGA TCATCCGTTT CTTTGCGAGC ATCTGGTGAT GGGGCAAGGC
TTGCATCACG ACGTCGCGTT GGCGCAATTC GACGGCTTCG AACTCGCCAG TGCCTATGAG
CCGATCTTCG ATATCAGCGT GCATGCGTTG GCGCAGTCGC TTTCGTCGGG GGTCGAAGGG
GTGGACCGTT TCGGCGATGA ACTCGGCTTC CAGGCCGTCA CGCACCAGGT CGACGCGGCG
CCGTTCGACG TATTCGATCC GTTCGACCGC ATCGCCGACG ATCAGGAACT GGTCGCGCTC
GACCGCATGT CGCGTGCGCT GCATGCCATC AATTTCTTTG GCGCCCAGCG GCATGGTCTG
CTATTTCTGC GCGTGCACGA GCGGCTGCTC AAGAGCGTGA AGTACGACCA CGGGCGGCAT
TTTTCGAGCG TGCTGGTGTC GTTCGGATTG AACCCTTCGC GGGTGGTGAT CGAGCTGCCC
GCAGCGGCGG TCGCGCACAA GACTTTTCTC GGTTATCTGA CCAAGAGCTA CCAGCACTAC
GGCTTCAAGG TGGCGGGCAA TCTGTCCAAT GCAGGGCAGA TTCTGTCGGT GTCGGAGACC
GCGCGGCTCG ACTTTCTCAA GATGGATGCA GGGACCGCTT TGCGCGATGC CACGGTTAAA
CCGCTAGTGG GTTATGCGGG CCGGCTGCGA ATCCCGCTGA TCTTCAACCG CGTGGTGGAT
GAAACGCAGT TCGAGGCTTT GCAGCAGTAC GATGTGCGCT TCGTGCAAGG GCCGCTGTTC
AATGCGCATT ATCACGACCG GGCGGTTTGA
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| Protein sequence | MDAPHYRHPY AYMIPPTIPN LIARSADHPF LCEHLVMGQG LHHDVALAQF DGFELASAYE
PIFDISVHAL AQSLSSGVEG VDRFGDELGF QAVTHQVDAA PFDVFDPFDR IADDQELVAL
DRMSRALHAI NFFGAQRHGL LFLRVHERLL KSVKYDHGRH FSSVLVSFGL NPSRVVIELP
AAAVAHKTFL GYLTKSYQHY GFKVAGNLSN AGQILSVSET ARLDFLKMDA GTALRDATVK
PLVGYAGRLR IPLIFNRVVD ETQFEALQQY DVRFVQGPLF NAHYHDRAV
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