Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0777 |
Symbol | |
ID | 6283295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 853970 |
End bp | 854755 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620341 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001894424 |
Protein GI | 187922782 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.866752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCCAA CATCCACTCC CTCCGAACCG CTCGACGAGC GCAAATTTGT CGTCGCTCTG GCACGCGGGC TGGATTTGCT GCGCGCGTTC AAGCCGGGCG AAACGATGCT CGGCAATCGC GATTTCGTCG AACGCACGGG TTTGCCGAAG GCGACCGTCA ACCGTCTTGC TTATACGCTG ACTGTGCTCG GTTATCTGCG GCTCGACGAA ACGCTGGGGA AATATGCGCT CGACGCCGGC GTGTTGTCGC TCGGTTTCGC GTTGCTTTCG GGTACGGACA CGCTCGAACT CGCGCGCCCG CACATGCGCG TATTCGCACG CGACGTGGGC GCCGCAGTGT CGCTCGGTTG CCGCGACGGG CTCGACATGA TCTATCTGGA GACGATCCGC AGCGAGACCG CATTGACGCT TGGGTTGGCG TCCGGTTCGA AACTGTCGAT GCTGACGAGT TCGATGGGCC GCGCGTATCT GGCCGTGCAA CCGTTCGACG TGCGCGCCGC GTTATTGGCG GAATTGAAAA AAGCGGCGGG CAAGGCAGGC GCCGAACTGG TCGCCGACGC CGAGCAGGAA ATCGCCGCCT TCGCCGAGCA GCGCTGCTGC TATTCGTTCC GCGCGTGGCA CGACGACGTG AACGCGGTCG CCGTGCCGTT TCGCGAGCCG CGCGACGGGC GCTGGCTGGT GCTGAGTTGC AGCGGGCCGG CGTCGTCGAT GGGAGAGGAT GTGTTTCGTG ACAACGTCGC GCCGCGGCTG AAGGCGGTTG CGCGGCGTTT AGGCGATACC GGTTGA
|
Protein sequence | MTPTSTPSEP LDERKFVVAL ARGLDLLRAF KPGETMLGNR DFVERTGLPK ATVNRLAYTL TVLGYLRLDE TLGKYALDAG VLSLGFALLS GTDTLELARP HMRVFARDVG AAVSLGCRDG LDMIYLETIR SETALTLGLA SGSKLSMLTS SMGRAYLAVQ PFDVRAALLA ELKKAAGKAG AELVADAEQE IAAFAEQRCC YSFRAWHDDV NAVAVPFREP RDGRWLVLSC SGPASSMGED VFRDNVAPRL KAVARRLGDT G
|
| |