Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0765 |
Symbol | glyA |
ID | 6283385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 845269 |
End bp | 846516 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642620329 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001894412 |
Protein GI | 187922770 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.186767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.156833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGACA GAGCCCAAAG CACCATCGCC AACGTCGATC CTGAACTCTG GAAGGTCATC GAGCAGGAAA ACCGCCGTCA GGAAGAGCAT ATCGAACTGA TCGCGTCGGA AAACTACACG AGCCCGGCTG TTATGGCTGC GCAAGGCTCG CAACTCACGA ACAAGTACGC TGAAGGGTAT CCGGGCAAGC GCTATTACGG CGGCTGCGAA TACGTCGACG TCGCCGAGCA GCTGGCGATC GACCGCGTCA AGCAACTGTT CGGCGCCGAA GCCGCGAACG TGCAGCCGAA CTCCGGCTCG CAGGCCAACC AGGGCGTGTT CTTCGCCATG CTCAAGCCGG GCGACACGAT CATGGGCATG AGCCTCGCGC ACGGTGGCCA CCTCACGCAC GGTTCGCCGG TCAACATGTC GGGCAAGTGG TTCAACGTGG TCAGCTACGG TCTGAACGAA GCCGAAGACA TCGACTACGA CGCTGCGGAG AAGCTCGCTC AGGAACACAA GCCGAAGCTG ATCGTGGCGG GCGCCTCCGC GTTCTCGCTG CGTATCGACT TCGAACGCAT GTCGAAAATC GCGAAGTCGG TCGGCGCGTA CTTCATGGTC GACATGGCGC ATTACGCCGG TCTGATCGCC GCGGGCGTCT ATCCGAACCC GGTGCCGCAC GCCGATTTCG TCACCACCAC CACGCACAAA AGCCTGCGTG GCCCGCGCGG CGGCGTGATC CTGATGAAGG CCGAGTTCGA AAAACAGATC AACTCGGCAA TCTTCCCGGG CATTCAAGGT GGTCCGCTCA TGCACGTGAT CGCCGGCAAG GCCGTCGCGT TCAAGGAAGC CCTGTCGCCG GAATTCAAGG CCTATCAGCA GCAAGTCGTC GAAAACGCGC GCGTGCTGGC TGAGACGCTC GTCAAGCGCG GTTTGCGTAT CGTGTCGGGC CGTACCGAAA GTCATGTGAT GCTCGTCGAC CTGCGCGCGA AGAAGATCAC CGGCAAGGCT GCGGAAGCCG CGCTGGGCGC CGCGCACATC ACCGTCAACA AGAACGCGAT CCCGAACGAT CCGGAAAAGC CGTTCGTGAC GAGCGGCGTG CGCCTCGGCT CGCCGGCCAT GACCACGCGC GGCTTCGGCG TCAAGGAAGC CGAGCAGGTG GGCAACCTGA TCGCCGACGT GCTGGACAAC CCGGAAGACG CCGCCACGAT CGAACGTGTG CGCGGCCAGG TCGCTGAGCT GACCCAGCGC TTCCCGGTTT ACCGCTAA
|
Protein sequence | MFDRAQSTIA NVDPELWKVI EQENRRQEEH IELIASENYT SPAVMAAQGS QLTNKYAEGY PGKRYYGGCE YVDVAEQLAI DRVKQLFGAE AANVQPNSGS QANQGVFFAM LKPGDTIMGM SLAHGGHLTH GSPVNMSGKW FNVVSYGLNE AEDIDYDAAE KLAQEHKPKL IVAGASAFSL RIDFERMSKI AKSVGAYFMV DMAHYAGLIA AGVYPNPVPH ADFVTTTTHK SLRGPRGGVI LMKAEFEKQI NSAIFPGIQG GPLMHVIAGK AVAFKEALSP EFKAYQQQVV ENARVLAETL VKRGLRIVSG RTESHVMLVD LRAKKITGKA AEAALGAAHI TVNKNAIPND PEKPFVTSGV RLGSPAMTTR GFGVKEAEQV GNLIADVLDN PEDAATIERV RGQVAELTQR FPVYR
|
| |