Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0761 |
Symbol | |
ID | 6284267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 842166 |
End bp | 842612 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642620325 |
Product | protein TolR |
Protein accession | YP_001894408 |
Protein GI | 187922766 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.156142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.243025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCT CTCGCTCCTC CAGCATGCGC GGCAGCCGCT CGCGCCGCGC GATGGCCGAC ATCAACGTCG TGCCTTACAT CGACGTGATG CTCGTGCTGC TCGTGATCTT CATGGTGACT GCGCCGCTCG TGGCCCCGTC GATCGTCAAT CTGCCGACCG TCGGCGGCGC CGCGCCGCAA CAGCAAACGC CGCCCGTGAT CGTGAACATT CGCGCAGACG GTAACATGAG CGTCAAGTAC AAGGACGACT CGGGCGCACA ACAGCAGGAG AACATGACGA AAGCCGATCT GAACGGCTTC ATCGCCGATC GCGCGCAATC GCATCCTGAT CAGCCGGTCG TGATCGCCGC CGACAAGACC GTCAAGTACG AAGTCGTCAT GAACGTGATG TCCGAGTTGA AAGCTCGCGG CGTCAAGCGC GTTGGATTGC TCGTCAAATC GCAATGA
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Protein sequence | MAGSRSSSMR GSRSRRAMAD INVVPYIDVM LVLLVIFMVT APLVAPSIVN LPTVGGAAPQ QQTPPVIVNI RADGNMSVKY KDDSGAQQQE NMTKADLNGF IADRAQSHPD QPVVIAADKT VKYEVVMNVM SELKARGVKR VGLLVKSQ
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