| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0759 |
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| Symbol | tolB |
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| ID | 6284265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 839702 |
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| End bp | 840994 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620323 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001894406 |
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| Protein GI | 187922764 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.397862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.413932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGA TGACCAAGCT AGGCCTGCGG ACACTTGTAG CGTCGTGCCT GATCGCCGTC
GGCGGCGCCG CCCACGCACA ACTCAACGTC CTCGTGACAG GCGTCGGGTC CACCCAGTTT
CCGATCGCAA CGGCGAATTT CGCCAACGAA GCGAACTCGC CGCAGCAAGT CAGCACGATC
GTGCGTCAGG ATCTGCAACG CAGCGGCAAA TTCACGAATA TCGACGCGGG CTCCACGCCG
GTTGCCGAAA CGGATTCCGT CGACCTCGGC AGCTGGAAGG CCAAGGGCGC CAACGCGTTC
GTGTCGGGTA GCGTGAACCG CTTGCCGAAC GGCCAGTACG AAGTGCGCTT CAAGCTGTAC
GACACCGTCA AGGGCGAAAG CCTCGGCGGC CTCGTGCTGG TGAGCCCGGA AAGCGGCCTG
CGCATGAGCG CGCACAAGGT CGCGGACTAC ATCTACGCGA AGCTGATGGG CGGCCGCGGC
GTGTTCGCCA CGCGCCTGTC GTACGTCATC AAGACGGGCG GCCGTTATCA ACTGCAGATC
TCCGATTCGG ACGGCCAGGA CGCGCACATC GCGCTGTCGA GCCCCGAGCC GATCATCTCG
CCGGCATGGT CGCCTGACGG CACCAAGGTC GCTTACGTTT CGTTCGAAAA GAAGAAGCCG
ATCGTCTACA TCCACGACCT GCCTACGGGC CGCCGCGTGG TCGTTTCGGA CCAGAAGGGC
AACAATAGTG CGCCGGCGTG GTCGCCGGAC GGACGCACGC TGGCCGTCGC GCTCTCGCGC
ACCGGCAACA CGCAGATTTT CGCCGTCAAT GCGGACGGCA GCGGCCTGCG CCGTCTCACG
CAAGGCAGCT CGATCGACAC CGAACCGTGC TTCTCGCCCG ACGGCCAGTC GATCTATTTC
ACCAGCGACC GTGGCGGCCA GCCGCAAATC TACAAGATGT CGGCGCAAGG TGAAAACGCC
GGCGCCGCGC AACGCGTCAC GTTCACGGGC AGCTACAACA CCAGCCCGCG CGTGAGCCCG
GACGGCAAAC AGCTCGCTTA TATCTCGCGC GTCGGCGGCG GGTTCAAGCT CTACATCCAG
GACCTGCAAG GCAACACCGC CACAGGCCTG ACGGACACGA CACATGACGA ATCGCCGAGT
TTCGCGGCGA ACGGTCAGTA CATTCTTTAC GCCACACAGG TGAACGGCCG TGGCGTGTTG
GCCGCAGTAT CGACCGACGG TCGCACTCGG CAGGTCCTGT CCGTTCAGGG TGGCAGCGTA
CGCGAGCCAT CCTGGGGCCC GTTTATGCAA TAA
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| Protein sequence | MSLMTKLGLR TLVASCLIAV GGAAHAQLNV LVTGVGSTQF PIATANFANE ANSPQQVSTI
VRQDLQRSGK FTNIDAGSTP VAETDSVDLG SWKAKGANAF VSGSVNRLPN GQYEVRFKLY
DTVKGESLGG LVLVSPESGL RMSAHKVADY IYAKLMGGRG VFATRLSYVI KTGGRYQLQI
SDSDGQDAHI ALSSPEPIIS PAWSPDGTKV AYVSFEKKKP IVYIHDLPTG RRVVVSDQKG
NNSAPAWSPD GRTLAVALSR TGNTQIFAVN ADGSGLRRLT QGSSIDTEPC FSPDGQSIYF
TSDRGGQPQI YKMSAQGENA GAAQRVTFTG SYNTSPRVSP DGKQLAYISR VGGGFKLYIQ
DLQGNTATGL TDTTHDESPS FAANGQYILY ATQVNGRGVL AAVSTDGRTR QVLSVQGGSV
REPSWGPFMQ
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