Gene Bphyt_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0720 
Symbol 
ID6281662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp791409 
End bp792902 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content64% 
IMG OID642620284 
ProductFAD linked oxidase domain protein 
Protein accessionYP_001894368 
Protein GI187922726 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.732845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC CCGCTGAACT GACGGCCGAA GTACTCGCCC AGCGCCAGCG CGAAGTCGTG 
CAGGCGTTGA TGGCCGTATT GCCGACCCAC TGTTTGCTGT TTCGCGAAGA AGACACCGTC
GCCTACGAAT GCGACGGGCT CGCCGCCTAC CGGCGTCTGC CGCTTGCGGT CGCGTTGCCG
GAGACGGAAT CGCAGGTGCA GCGCATCGTG CAGATCTGCC ACCGTCTCGA CGTGCCGATC
GTGCCGCGCG GCGCGGGCAC CGGCCTATCG GGCGGCGCCA TGCCGATTCG TCACGGCGTG
GTGGTGTCGC TCGCGCGCTT TCGCAAGATC GTCGAAGTCG ATTCATACGC GCGGACCGCC
ACCGTGCAAC CGGGTGTGCG CAATCTGTCG ATCTCCGAAG CCGCCGCACC TTACGGTCTG
TATTACGCGC CGGACCCGTC GTCGCAGATC GCCTGCACGA TCGGCGGCAA TGTCTCGGAA
AATTCCGGCG GCGTTCACTG CCTCAAATAC GGTCTCACGG TGCATAACGT GTTGCGCGTG
CGGGCCGTCA CCATGGAAGG CGAGATCGTC GAATTCGGCT CGCTCGCCCC CGACGCGCCC
GGCCTCGATC TGCTGGCCGT GCTGATCGGC AGCGAGGGCA TGTTCGCGAT CGTGACCGAA
GTCACGGTCA AGCTGATCCC GAAGCCGCAA ACGGCGCAGG TCATCATGGC CAGTTTCGAC
GATGTCGTGA AAGGCGGCGA CGCGGTCGCC GGCATCATCG CGGCGGGCAT CATCCCGGCG
GGTCTGGAGA TGATGGACAA ACCGGCCACG CGCGCGGTCG AGGAATTCGT CCACGCCGGC
TACGATCTCG ACGCGGCGGC GATCCTGCTA TGCGAATCGG ACGGCACACC CGAAGAAGTC
GCGGATGAAA TCGTGCGCAT GACCGCTGTA TTGCGCGAAC AGGGCGCCAC ACGCATCCAG
ATTTCCCGCT CGGAGAGCGA ACGGCTGCGC TTCTGGTCGG GGCGCAAGAA TGCGTTCCCC
GCCGCCGGGC GTATTTCACC CGACTATTAC TGCATGGACG GCACGGTGCC ACGCCGCAGT
ATCGGGCCGC TGCTGGCGCG CATCGAGGCG ATGGAGAAGA CCTACAACCT GCGCTGCATC
AACGTTTTCC ACGCGGGCGA CGGCAACATG CATCCGCTGA TCCTGTTCAA CGGCAATGAC
CTGGACGAAT GGCACCGGGC CGAAGCGTTC GGTTCCGACA TCCTCGAAGC ATGCGTCGAA
CTGGGCGGCA CGGTGACCGG CGAGCACGGC GTCGGCATCG AGAAGATCAA TTCGATGTGC
GTGCAGTTTT CGCCAGAAGA ACGCGATACG TTCCACGCGG TCAAGCGAGC TTTCGACGCG
CCTGGCCTGC TCAACCCCGA CAAAGGCATC CCCACGCGAG CGCGTTGCGC CGAGTACGGC
AAAATGCATG TGCGCGGCGG CTTGCTGCCG CATCCTGAGC TGCCGCGGTT CTAA
 
Protein sequence
MNAPAELTAE VLAQRQREVV QALMAVLPTH CLLFREEDTV AYECDGLAAY RRLPLAVALP 
ETESQVQRIV QICHRLDVPI VPRGAGTGLS GGAMPIRHGV VVSLARFRKI VEVDSYARTA
TVQPGVRNLS ISEAAAPYGL YYAPDPSSQI ACTIGGNVSE NSGGVHCLKY GLTVHNVLRV
RAVTMEGEIV EFGSLAPDAP GLDLLAVLIG SEGMFAIVTE VTVKLIPKPQ TAQVIMASFD
DVVKGGDAVA GIIAAGIIPA GLEMMDKPAT RAVEEFVHAG YDLDAAAILL CESDGTPEEV
ADEIVRMTAV LREQGATRIQ ISRSESERLR FWSGRKNAFP AAGRISPDYY CMDGTVPRRS
IGPLLARIEA MEKTYNLRCI NVFHAGDGNM HPLILFNGND LDEWHRAEAF GSDILEACVE
LGGTVTGEHG VGIEKINSMC VQFSPEERDT FHAVKRAFDA PGLLNPDKGI PTRARCAEYG
KMHVRGGLLP HPELPRF