| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0719 |
|---|
| Symbol | glcE |
|---|
| ID | 6281661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 790171 |
|---|
| End bp | 791259 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642620283 |
|---|
| Product | glycolate oxidase FAD binding subunit |
|---|
| Protein accession | YP_001894367 |
|---|
| Protein GI | 187922725 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.84862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGG ACGACATCGT CGCCGTGTGG TCGGAACGTG TGCGTTCGGC CAGCGCCGAG
GGGCACGCGT TGCGCATCCG TGGCGGCGGC ACCAAAGACT GGTACGGTCA GACGCTGGAA
GGTGACATCC TCGACACGCG CGCTTATCGC GGCATCATTG CGTACGACCC GGCGGAGCTG
GTGATCACCG CGCGCGCGGG CACGCCCTTG CTGGAGATCG AGGCCGCGCT CGCCGAGCAT
CATCAGATGC TCGCCTTCGA GCCGCCGCAC TTCGGGCCGC AGGCTACCTT CGGCGGCTGC
ATCGCGGCGG GCATTGCCGG TCCGCGCCGC CCGTCGGCCG GCGCGGCGCG CGACTTCGTG
CTGGGCGCCG TGATCATGAA CGGCCAGGGC CAAAAGCTGC ATTTCGGCGG CCAGGTGGTG
AAGAATGTCG CCGGCTACGA CGTCTCACGC CTGATGGCCG GCTCGCTCGG CACGCTGGGA
CTGATCCTCG AACTGTCGAT CAAGGTGCTG CCGTTGCCGC AGGCCGAAGC CACGCTCAAA
TTCGACATGA ACGGCACCGA TGCGGTCCGC AAGCTCAACG AATGGGGCGG CCGGCCGTTG
CCGATTACCG CGAGTGCGTG GCGTCACGGC ACGCTGGTTG TGCGCCTTGC CGGCGCCGAG
GCCGCGGTCA AGTCGGCGAA GATGGCGCTC GGCGGCGAAG TGGTCGATGC CGTCGAAGCC
GAACGCTTCT GGGCCGGCCT GCGCGAACAG ACCGACTCGT TCTTCGCCGC CATCCCGCCG
CGGGCCGCAC TGTGGCGCCT TGCTCTGCCT TCGATTACGG AGCCGTTGCA ATTGCCCGGC
GCGCAACTCA TGGAGTGGGG CGGCGGCCAG CGCTGGTGGA TCACGGACAC CGACGCGCAG
ACCGTGCGCA TCAGCGCCAA GCAGGCTGGC GGCCACGCCA CGATCTTCCG CGCCGGCCAC
GGCTACGATC GCGGCGCCGG CGTGTTCACG CCGCTTCCCG CGCCGCTGAT GAAAATCCAT
CGCGGCCTGA AAACCGCTTT CGACCCGGCC CGCATCTTCA ATCGCGGCCG TCTCTACCCC
GACTTCTGA
|
|---|
| Protein sequence | MEEDDIVAVW SERVRSASAE GHALRIRGGG TKDWYGQTLE GDILDTRAYR GIIAYDPAEL
VITARAGTPL LEIEAALAEH HQMLAFEPPH FGPQATFGGC IAAGIAGPRR PSAGAARDFV
LGAVIMNGQG QKLHFGGQVV KNVAGYDVSR LMAGSLGTLG LILELSIKVL PLPQAEATLK
FDMNGTDAVR KLNEWGGRPL PITASAWRHG TLVVRLAGAE AAVKSAKMAL GGEVVDAVEA
ERFWAGLREQ TDSFFAAIPP RAALWRLALP SITEPLQLPG AQLMEWGGGQ RWWITDTDAQ
TVRISAKQAG GHATIFRAGH GYDRGAGVFT PLPAPLMKIH RGLKTAFDPA RIFNRGRLYP
DF
|
|---|
| |