| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0717 |
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| Symbol | |
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| ID | 6281799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 788200 |
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| End bp | 788898 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620281 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_001894365 |
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| Protein GI | 187922723 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.799329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATC TGATTCACAA CCTCGAGGCG GTGCAGCAGC GCATCGCCAT GGCCGCGCAC
GTGGCCGGAC GCGATACGCG CTCGGTCCAT CTGCTCGCGG TCTCCAAGAC CTTCCCCGCC
GAAGACGTGC GCGCCGCCTA CGCCGCCGGC CAGCGCGCGT TCGGTGAAAA CTACGTGCAG
GAAGCGCTCA CCAAGATCGA GGCGCTCGCC GATCTGCGCG CCACGCTCGA ATGGCATTTC
ATCGGCCCGT TGCAATCGAA CAAGACGCGG CCGGTCGCCG AGCAGTTCGA CTGGGTGCAC
TCAGTCGATC GGTTGAAGAT CGCGCAGCGG CTCTCGGAGC AGCGTCCCGA CAATTTGCCG
CCGCTCAACG TGTGCTTGCA AGTCAACATC AGCGGCGAGG CGTCCAAGAG CGGCGTGAGC
ATTCCCGAGG CGGTGGAAGT CGCGCAGGCG ATCGCCGCGC TGCCGAAGCT GAATTTGCGC
GGCCTGATGG CGATTCCCGA GCCGGCCGGC GGCATCGACG AACAACGCGT GCCGCATCGG
CACTTGCGCG AGTTGTTCGA GCGTCTATGC AACGACGGGC TCGAACTCGA CACGCTGTCC
ATGGGCATGT CGAGCGATCT CGAAGCCGCC GTGCTGGAAG GCGCGACGAT CGTGCGCGTC
GGCACCGCGA TCTTCGGCGC GCGAGATTAC TCTAACTAA
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| Protein sequence | MPDLIHNLEA VQQRIAMAAH VAGRDTRSVH LLAVSKTFPA EDVRAAYAAG QRAFGENYVQ
EALTKIEALA DLRATLEWHF IGPLQSNKTR PVAEQFDWVH SVDRLKIAQR LSEQRPDNLP
PLNVCLQVNI SGEASKSGVS IPEAVEVAQA IAALPKLNLR GLMAIPEPAG GIDEQRVPHR
HLRELFERLC NDGLELDTLS MGMSSDLEAA VLEGATIVRV GTAIFGARDY SN
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