| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0702 |
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| Symbol | secF |
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| ID | 6281446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 773006 |
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| End bp | 773956 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642620266 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001894350 |
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| Protein GI | 187922708 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.686375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.807805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTT TCCGTTTCCG CAAAGACATT CCGTTCATGC AGCGTGCGTT GATTTTCAAC
GCGATCTCGC TGCTGACGTT CCTTGCTGCT GTGTTTTTCC TGCTGCATCG CGGGCTGCAC
CTGTCGGTGG AGTTCACCGG CGGTACGGTC GTCGAAGTGC AGTATCCGGG CGCCGCACCG
CTCGAACCGG TGCGCGCTAC GCTGGGCAAG CTCGGTTATG CCGACGCACA GGTGCAGAAC
TTCGGCACCT CGCGCGACGT GCTGATCCGT CTGCCGCTCA AGCAGGGCTA TACCTCCGCG
CAACAGAGCG ATCAGGTGAT GACCGCGCTG AAGGCCGAGA CGCCGCAGGT GCAACTGCAA
CGCGTCGAGT TCGTCGGACC GCAGGTCGGC AAGGAGCTCG CCACCGACGG CCTGCTCGCG
CTCGCCTGTG TGGTGGTCGG CATCGTGATC TACCTGTCGT TCCGCTTCGA ATGGAAGTAC
GCGGTGGCCG GCGTGATCGC GAACTTGCAC GACGTGATCA TCATTCTCGG CTTCTTCGCG
TTCTTCCAGT GGGAGTTCTC GCTGTCGGTG CTGGCCGCGG TGCTTGCGGT GCTCGGCTAT
TCGGTGAACG AGTCGGTGGT TATCTTCGAC CGGATTCGTG AGACCTTCCG CCGCGAGCGC
AAGCTGACCG TGATCGAGGT GATCAACCAC GCAATCACCA GCACCATGTC GCGAACCATC
ATCACCCACG GCTGTACGCA GATGATGGTG CTGTCGATGT TCCTGTTCGG CGGCCCGACG
CTGCACTACT TTGCCTTGGC GCTGACGGTC GGTATTCTGT TCGGTATCTA CTCGTCGGTG
TTCGTCGCCG CGGCGCTCGC CATGTGGTTC AGCGTGAAGC GCGAAGACCT GATCAAGGAC
AGGAAGGATC GCCCCGACGC GGACGACCCG AACGCGGGTG CGCAAGTCTG A
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| Protein sequence | MEFFRFRKDI PFMQRALIFN AISLLTFLAA VFFLLHRGLH LSVEFTGGTV VEVQYPGAAP
LEPVRATLGK LGYADAQVQN FGTSRDVLIR LPLKQGYTSA QQSDQVMTAL KAETPQVQLQ
RVEFVGPQVG KELATDGLLA LACVVVGIVI YLSFRFEWKY AVAGVIANLH DVIIILGFFA
FFQWEFSLSV LAAVLAVLGY SVNESVVIFD RIRETFRRER KLTVIEVINH AITSTMSRTI
ITHGCTQMMV LSMFLFGGPT LHYFALALTV GILFGIYSSV FVAAALAMWF SVKREDLIKD
RKDRPDADDP NAGAQV
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