| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0689 |
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| Symbol | mnmA |
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| ID | 6282429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 756778 |
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| End bp | 757929 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620253 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001894337 |
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| Protein GI | 187922695 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.21577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC AGAAAGTCGT AGTAGGCATG TCGGGCGGCG TCGATTCGTC CGTTACCGCA
TGGCTGCTGA AGGAACAGGG CTACGACGTG GTCGGCCTGT TCATGAAAAA CTGGGAAGAC
GACGACGACA GCGAATACTG CTCGACGCGG CAGGACTGGA TCGACGTGGT CTCGGTGGCG
GATCTGATCG GCATCGACGT CGAAGCGGTC AACTTCGCCG CGGAATACAA GGACCGGGTG
TTCGCCGAAT TCCTGCGCGA ATACTCGGCC GGCCGCACGC CGAATCCGGA CGTGCTGTGC
AATGCCGAAA TCAAGTTCAA GGCGTTCCTC GACCACGCCA TGTCGCTCGG CGCGGAAACC
ATCGCGACCG GCCATTACGC GCGCGTGCGC CAGAACGAGC GCAACGGCCG CTTCGAGCTG
CTGAAGGCGT TCGACCATAC GAAAGACCAG TCGTACTTTC TGCATCGGCT GAATCAGGCG
CAATTGTCGA AAACACTGTT TCCGCTCGGC GAGATTCCGA AAACGAAAGT GCGCGAAATC
GCCGAGCAGA TCGCGCTGCC CAATGCGAAG AAGAAAGACT CGACCGGCAT CTGCTTTATC
GGCGAACGGC CGTTCCGCGA CTTCCTGAAC CGCTATCTGC CGACGAAACC CGGCCCGATG
AAAACCACCG ACGGCAAAGT GGTCGGCGAA CATATCGGCC TCGCGTTCTA CACGTTCGGC
CAACGCAAGG GCATCGGCCT CGGCGGCAGC AAGGACGGCA GCGGCGAGCC GTGGTTCGTC
GCCGGCAAGG ACATTGCGTC GAACACGCTG TACGTCGCGC AGGGTCACGA TCATGCGTGG
CTGCTCAGCC ATACGCTGTC CGCCGGCAAT ACGAGCTGGG TGGCGGGCGA GCCGCCGGCG
GACGGCTTCG CGTGCGGCGC CAAGACCCGT TACCGGCAAG CGGATGCACC ATGCACGTTT
AGCAGCGCGG GCAGCGGCGA AGGCCTCTTC GAACTGAATT TCGACGCCGC GCAATGGGCT
GTCACACCGG GGCAATCTGC GGTGCTCTAC GATGGCGACG TGTGCCTCGG CGGCGGCATC
ATCGAACATG CGGTCACCGG GCAGCCGGTC GCGCGCGAGC CGCAAAAAGC GGCGCTGCTG
AACGCCCGTT GA
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| Protein sequence | MSKQKVVVGM SGGVDSSVTA WLLKEQGYDV VGLFMKNWED DDDSEYCSTR QDWIDVVSVA
DLIGIDVEAV NFAAEYKDRV FAEFLREYSA GRTPNPDVLC NAEIKFKAFL DHAMSLGAET
IATGHYARVR QNERNGRFEL LKAFDHTKDQ SYFLHRLNQA QLSKTLFPLG EIPKTKVREI
AEQIALPNAK KKDSTGICFI GERPFRDFLN RYLPTKPGPM KTTDGKVVGE HIGLAFYTFG
QRKGIGLGGS KDGSGEPWFV AGKDIASNTL YVAQGHDHAW LLSHTLSAGN TSWVAGEPPA
DGFACGAKTR YRQADAPCTF SSAGSGEGLF ELNFDAAQWA VTPGQSAVLY DGDVCLGGGI
IEHAVTGQPV AREPQKAALL NAR
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