| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0686 |
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| Symbol | glyS |
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| ID | 6283455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 751602 |
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| End bp | 753701 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620250 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001894334 |
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| Protein GI | 187922692 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.509477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAC CCCATCAAGC TACCCTGCTC GTCGAGCTGC TGACCGAAGA ACTGCCGCCG
AAAGCGCTCG CGCGTCTCGG CGACGCCTTC GCGGAAGGCA TTGCGCAGCG CCTCGCGGCG
CGCGACCTGA TCGAAGGCGA ACTGTCGTTC GAACGTTATG CCACGCCGCG CCGCCTCGCC
GTCACGATCA AGAACGTGCG CGCGGTTGCG CCGGAAAAAC ACGTGCGCGA AAAAGTGCTG
CCGGTTTCCG TCGCGCTGGA TAAAGACGGC CAGCCCACCG CGCCGCTCGC CAAAAAACTC
GCGGCGCTCG GCTTCCCCGA TTTTTCGGTG AACGACCTGG AGCGCGCGCA GGACGGCAAG
GCCGAAGCCT TCTTCCTGCG CTATGCCGCG CCGGGCGCCA CGCTCGCCGA CGGCCTGCAG
AGCGCGCTCG ACGAAACGCT CGCCAAGCTG CCGATCCCGA AGGTCATGAC GTATCAGCGT
CCCGACGGCA CCAACGTGCA ATTTGTGCGT CCGGCGCATC GGCTGACCGC GCTGCATGGC
GAACAGGTCG TGCCGGTGAG CGCGCTCGGC ATCGACGCCG ACGACACCAC GCTCGGCCAT
CGTTTCCTCT CCGAAGGTTT CGTGCAGATC CAGCATGCGG ATACGTACGC CGAGACGCTG
CTGCACAAAG GCCACGTGGT AGCGAATTTC GCCGACCGCA AGGAAACCAT CCGCACGCAT
CTGCTCGCGC AAGCCGACGG CGATCAGGTC GTGATGCCGG AATCGCTGCT TGACGAAGTG
ACGTCGCTGG TCGAATGGCC GGTGGTCTAC GCGTGCCGTT TCGGGGACGA ATTCCTGCAA
GTGCCGCAGG AATGCCTGAT CCTCACCATG CAGACGAACC AGAAATACTT CGCGCTGACC
GATGCGAACG GCAAGCTGCG CTCGCGCTTC CTGATCGTGT CGAACATCGA AACGTCCACG
CCGGGCGATA TCGTCGAAGG CAATGAACGC GTGGTGCGTC CGCGTCTGGC CGATGCGAAG
TTCTTCTTCG AGCAGGACAA GAAGAAGCCG CTCGCGGACC GCGTGCCGCT GCTCGCAAAC
GTCGTGTATC ACAACAAGCT GGGCTCGGCG CTGCAGCGCG TGGAGCGCGT AGAAGCGCTG
GCCGGCGCGA TTGCCGAACT GATCGGCGCG GACGTGGCGC TCGCAAAGCG CGCCGCGCGT
CTGGCCAAGG CCGACCTGAT CACCGACATG GTGGGCGAAT TCCCCGAGCT GCAAGGCACG
ATGGGCACGT ACTACGCGCG CCACGACGGC GAGCCGGAAG AAGTCGCGCT CGCGTGTTCG
GAACACTATC AGCCGCGTTT CTCGGGTGAC GCGTTGCCCA CCACCGCGAC CGGCACCGTC
GTCGCGCTGG CCGACAAGCT CGAAACGCTG GTCGGCATCT GGGGCATCGG CCTGCAGCCC
ACCGGCGAGA AGGACCCGTT CGCGCTGCGT CGCCACGCGC TCGGCGTGCT GCGCATTCTC
GTCGAGAAGC AACTGCCGGT CGATCTGGTC GAACTGCTGC GTACTGCTCA CGCGCAATTC
GCAGCGGTGC CGAACGTGAC GGATTCCACG CAAGCCATTT ACGAATTCAG CATGGACCGT
TTGCGCGGCC TGCTGCGTGA ACGTGGCTAC GCGCCGGGCG AAATCGACGC GGTGCTGGCG
CTGAATCCCA CGCGTCTCGA CGACATCGTC GCGCGTCTGG ATGCCGTGCG TGAATTCGCA
GCGTTGCCGG AAGCGGCGTC GCTCGCGGCG GCCAACAAGC GCATCTCGAA CATTTTGAAG
AAGTCGGAAG GCGCGGCGAC CGGCGGCGTG CAGGTTGCGC TGCTCACCGA GGCTGCAGAA
AAGGCGCTGT ACGCGCAACT CGAACAAGTC GCGCCGCGCG TGCAATCGCA ACTGGCGGCA
CGCGACTACA CGGGCGCGCT AACCGCGCTC GCCGCGTTGC GCGAACCGGT CGACACGTTC
TTCAACGACG TGATGGTCAA TGCCGAAGAT CCGGCGTTGC GCGCCAACCG TTTGGCTTTG
CTCGGCGCAC TGCATCAGCA GATGAATTGC GTCGCCGACA TTTCCCGACT CGCCGCCTGA
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| Protein sequence | MTQPHQATLL VELLTEELPP KALARLGDAF AEGIAQRLAA RDLIEGELSF ERYATPRRLA
VTIKNVRAVA PEKHVREKVL PVSVALDKDG QPTAPLAKKL AALGFPDFSV NDLERAQDGK
AEAFFLRYAA PGATLADGLQ SALDETLAKL PIPKVMTYQR PDGTNVQFVR PAHRLTALHG
EQVVPVSALG IDADDTTLGH RFLSEGFVQI QHADTYAETL LHKGHVVANF ADRKETIRTH
LLAQADGDQV VMPESLLDEV TSLVEWPVVY ACRFGDEFLQ VPQECLILTM QTNQKYFALT
DANGKLRSRF LIVSNIETST PGDIVEGNER VVRPRLADAK FFFEQDKKKP LADRVPLLAN
VVYHNKLGSA LQRVERVEAL AGAIAELIGA DVALAKRAAR LAKADLITDM VGEFPELQGT
MGTYYARHDG EPEEVALACS EHYQPRFSGD ALPTTATGTV VALADKLETL VGIWGIGLQP
TGEKDPFALR RHALGVLRIL VEKQLPVDLV ELLRTAHAQF AAVPNVTDST QAIYEFSMDR
LRGLLRERGY APGEIDAVLA LNPTRLDDIV ARLDAVREFA ALPEAASLAA ANKRISNILK
KSEGAATGGV QVALLTEAAE KALYAQLEQV APRVQSQLAA RDYTGALTAL AALREPVDTF
FNDVMVNAED PALRANRLAL LGALHQQMNC VADISRLAA
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