| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0677 |
|---|
| Symbol | pdxA |
|---|
| ID | 6283635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 743953 |
|---|
| End bp | 744963 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642620241 |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_001894325 |
|---|
| Protein GI | 187922683 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGCG CCACCCAGTC CGCCCGCCCA CCGCTGCAGA TCGCGATCAC GACCGGCGAG
CCCGCCGGCG TCGGTCCCGA ATTGACAGTG CAGGCGCTGG CGGGCGCGGC GGCGCATTGG
CCGCACGCGC AGTTCACCGT GCTGGGCGAC GCCGGCCTGC TCGCCGAACG CGCGCGGGCC
GTGGGCGTCG ACTGGAGCGC GCTGGTCGCG GACGGCAAAC GCGTGCGCCT CCAGCACCGG
CCGCTCGGAG CGCCTGCCGT TGCGGGCAAG CTCAACGCGG CCAACGGCCG CTACGTGCTC
GACCTGCTCG ACAGAGCGAT CGATGGCGCG GTAGCCGGCA CGTTCGACGC GATCGTCACT
GCGCCGCTGC AAAAGAGCAC CATCAACGAT GCCGGCGTGC CGTTCACCGG CCACACCGAA
TATCTCGCCG AGCGCACGCA CACGCCGCGC GTGGTGATGA TGCTGGCCGG CACCGGCAAG
CGCCCGTTGC GCGTCGCACT GGCGACCACG CATCTGCCGC TCAAGGATGT GTCCGCCGCG
TTGTCCATCG AAGGCATTGT CGAGACGCTG CGCATCATCG ATCACGATTT GCGGCATCAC
TTCGGCTTGC CGGCGCCGCG CATCCTCGTG ACGGGGCTGA ACCCGCACGC GGGCGAAAAC
GGTTATCTCG GCCGCGAGGA AATCGATGTC ATCACACCGG CGCTGAAGCT CGCGGACGCT
CAAGGCATCG ACGCGCGCGG TCCGTATCCG GCCGACACGC TGTTCCAGCC GCGTTATCTG
GACGAGGCCG ATTGCGTGCT GGCCATGTTC CACGACCAGG GCCTGCCGGT ATTGAAGTAC
GCCACGTTCG GCGAAGGCAT CAATGTCACG CTCGGTTTGC CGATCATCCG CACGTCGGTC
GATCACGGCA CCGCGCTCGA CCTGGCCGGC ACCGGCCGCG CCGACGCGGG CAGCCTGATC
GCCGCGATCG AGACGGCGGT GTCGATGGCG CAGCACCGCC GCGCGGGCTG A
|
|---|
| Protein sequence | MTSATQSARP PLQIAITTGE PAGVGPELTV QALAGAAAHW PHAQFTVLGD AGLLAERARA
VGVDWSALVA DGKRVRLQHR PLGAPAVAGK LNAANGRYVL DLLDRAIDGA VAGTFDAIVT
APLQKSTIND AGVPFTGHTE YLAERTHTPR VVMMLAGTGK RPLRVALATT HLPLKDVSAA
LSIEGIVETL RIIDHDLRHH FGLPAPRILV TGLNPHAGEN GYLGREEIDV ITPALKLADA
QGIDARGPYP ADTLFQPRYL DEADCVLAMF HDQGLPVLKY ATFGEGINVT LGLPIIRTSV
DHGTALDLAG TGRADAGSLI AAIETAVSMA QHRRAG
|
|---|
| |