| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0652 |
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| Symbol | ubiB |
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| ID | 6283526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 712688 |
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| End bp | 714265 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620217 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_001894301 |
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| Protein GI | 187922659 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.559631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTC TGCGTTTCCT CAAGATTTTC TTTACGGTCA TCCGCTTCGG TCTCGATGAG
ATGATGCTTA GCCGCGTCAA CGACCGGCGC GTGCGTCTGC TGCTGCGTAT CACCACGATC
GGCCGCAAGT TCGACGCGCC GCCGGGCGTG CGTCTGCGGC TCGCGCTGGA AAGCCTCGGA
CCAATCTTCG TCAAGTTCGG GCAGGTTTTG TCGACGCGGC GCGATCTGCT GCCAGTCGAT
ATCGCCGACG AACTCGCCAA GCTCCAGGAT CAGGTGCCGC CGTTCGAATC GGCGGTGGCG
ATCAGGCTGG TGGAAAATGC GCTCGGCGCA CCGGTCGACG TGCTGTTCGA CGACTTCGAG
CGGGTGCCGG TGGCGAGCGC GTCGATCGCG CAGGTGCACT TCGCTACGGT GAAGGCAGGG
CAGCACGCCG GCAAGGCGGT GGCCGTGAAG GTGCTGCGCC CGAACATGCT GCCCGTGATC
GATTCCGACC TCGCGTTGCT GCGCGATATC GCCGTGTGGG CCGAGCGCCT GTGGGCCGAC
GGCAAGCGTC TGAAGCCGCG CGAGGTGGTC GCCGAATTCG ACAAATACCT GCACGACGAA
CTCGACCTGA TGCGCGAGGC GGCCAACGGC AGCCAGTTGC GGCGCAACTT CGCCGGGCTC
GATCTGCTGC TGGTGCCGGA GATGTACTGG GAGTTCTGCA CGCCCACGGT GCTCGTCATG
GAGCGCATGG TCGGCGTGCC GATCAGCCAG GTGGAGACGC TGCGCGCCGC GGGTGTGGAT
ATTCCGAAGC TTGCGCGCGA AGGCGTCGAA ATCTTCTTCA CCCAGGTGTT CCGCGACGGC
TTTTTTCACG CCGACATGCA CCCGGGCAAC ATTCAGGTGA GTCTCGATCC GGCGCACTTC
GGCCGCTATA TCGCGCTCGA CTTCGGCATT ATCGGCGCGC TGTCGGACTT CGATAAGAAC
TACCTCGCGC AGAACTTCCT CGCGTTCTTC AAGCGCGATT ACCATCGCGT CGCCACGCTG
CATCTGGAGT CGGGCTGGGT ACCGCCGACC ACCCGCGTCG AGGAACTCGA GAGCGCCATT
CGTGCGGTCT GCGAGCCGTA CTTTGATCGC GCGCTGAAGG ATATTTCGCT CGGCCAGGTT
CTGATGCGCC TGTTCTCGAC CTCGCGCCGT TTCAATGTCG AGATCCAGCC GCAACTGGTG
CTGCTGCAAA AGACCATGTT GAACGTGGAA GGGCTCGGCC GCTCGCTCGA TCCTGAACTG
GATCTGTGGA AGACGGCCAA GCCTTACCTC GAGCGCTGGA TGAACGAACA GATCGGCCTG
CGCGGCTGGT ACGAGCGTCT GAAGATCGAG GCGCCGCAGT GGAGCAAGAC ACTGCCGCAG
TTGCCGCGCC TGATTCATCA TGCGCTGGCC GAGCGTCATG ACAACAAACG CGGCGCGAAC
GACGACATGA TTCGCCAGAT TCTGCTCGAG CAGAAGCGCA CCAACCGGCT GTTGCAAGGC
TTGCTGCTGT TCGGTGTGGC GGTCGGCGTC GGCGCGGTGT TGGCGCGGGC GTTTCTGGCG
CTCGCTTACG GCGGTTGA
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| Protein sequence | MRFLRFLKIF FTVIRFGLDE MMLSRVNDRR VRLLLRITTI GRKFDAPPGV RLRLALESLG
PIFVKFGQVL STRRDLLPVD IADELAKLQD QVPPFESAVA IRLVENALGA PVDVLFDDFE
RVPVASASIA QVHFATVKAG QHAGKAVAVK VLRPNMLPVI DSDLALLRDI AVWAERLWAD
GKRLKPREVV AEFDKYLHDE LDLMREAANG SQLRRNFAGL DLLLVPEMYW EFCTPTVLVM
ERMVGVPISQ VETLRAAGVD IPKLAREGVE IFFTQVFRDG FFHADMHPGN IQVSLDPAHF
GRYIALDFGI IGALSDFDKN YLAQNFLAFF KRDYHRVATL HLESGWVPPT TRVEELESAI
RAVCEPYFDR ALKDISLGQV LMRLFSTSRR FNVEIQPQLV LLQKTMLNVE GLGRSLDPEL
DLWKTAKPYL ERWMNEQIGL RGWYERLKIE APQWSKTLPQ LPRLIHHALA ERHDNKRGAN
DDMIRQILLE QKRTNRLLQG LLLFGVAVGV GAVLARAFLA LAYGG
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