Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0640 |
Symbol | |
ID | 6283986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 698299 |
End bp | 699189 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642620205 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_001894289 |
Protein GI | 187922647 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.360416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTAA CCGCCGAACC GCTGGCTTTC GATATCGTCG CGCGCATTGC CGAATGCGCA CCGGAACTGC GCTCGGCTGA ACGCAAGGTC GCCGCGCTGA TTCTCGACGA TCTGACGGGC GCCTCGCGCG CCAGCATCGG CGCGCTCGCG CAGCAGGCCG GCGTGAGCGT CGCGACCGTG ACGCGCTTTG CCAAGGCGGT AGGCTGCCGC GATGTGCGTG AGCTGAAACT GCGGCTCGCG CAGGCGGCCG CCGTCGGTCA GCGCTTCCTG CAGGCCGGCG GCCCAAACGA CGCGCCCGAG CCGATCGCGA CTCGCGTGTT CGATGAATTG CAGACCGCGC TCGCGCACAA CCACCAATTG CTGCGCCAGG CGCCGCTGGG CAATGCGGCT GCGGCTTTGC GCGGCGCGCG CATGATCTAC GTGTTCGGCA TGGGCGGCGG CTCGACCGCG CTCGCCGACG AGATGCGCTT CCGGCTCGTG CGCCTGGGCC GGCCTGTCGC GACCTATCAG GACGGCTTGC TGCAACGGAT GGTGGCCAGC ACTGTGTCGC GCGAATGCGT GGTGATCGCG CTGTCTACTA CCGGGCGCGT GCCCGAGATG GTCGAGAACT GCAAGATCGC GCGCAGCTAT GGCGCGACCG TGATCGCGCT GACCGCGCCG GCTTCGCCGC TCGCGCGGCT CGCCGATTGG GTGATTCCGA TCGTCGCGTT TGAGACCGAT TTCATTTACA AGCCGTCGTC GTCGCGTTAC GCAATGATGA TGGCGCTCGA TGTGCTCGTC ACCGAACTTG CCGTCAGTCA GGGTGACGAG AGCCGCGAAT TGCTGCGCCG CATGAAGCAT GTACTCGACA CGCACCGCGG CGGCGGCGAT CGACAACCGT TAGGAGACTG A
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Protein sequence | MNLTAEPLAF DIVARIAECA PELRSAERKV AALILDDLTG ASRASIGALA QQAGVSVATV TRFAKAVGCR DVRELKLRLA QAAAVGQRFL QAGGPNDAPE PIATRVFDEL QTALAHNHQL LRQAPLGNAA AALRGARMIY VFGMGGGSTA LADEMRFRLV RLGRPVATYQ DGLLQRMVAS TVSRECVVIA LSTTGRVPEM VENCKIARSY GATVIALTAP ASPLARLADW VIPIVAFETD FIYKPSSSRY AMMMALDVLV TELAVSQGDE SRELLRRMKH VLDTHRGGGD RQPLGD
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