| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0639 |
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| Symbol | |
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| ID | 6283985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 696862 |
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| End bp | 698139 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620204 |
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| Product | putative D-serine deaminase (d-serine dehydratase) protein |
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| Protein accession | YP_001894288 |
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| Protein GI | 187922646 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.209216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTA CAAACTATCA GGGCGCAACG ATTGATCCTT ATAGCAAGGG CTTGGGCATG
GTTCCGGGCA CCAGCATTCA ACTCACGGAT GCCAAGCGCC TCGAGTGGAA TTTGCTGAAC
GAAGACGTGA GCCTGCCGGC CGCCGTGCTG TACGCGGACC GCGTGGAGCA CAACCTCAAG
TGGATGCAGG CATTCGTCGC GCAATACGGC GTCAAACTCG CGCCGCACGG CAAGACGACG
ATGGCGCCGC AGCTGTTTCG CCGTCAGCTC GAAAATGGCG CGTGGGGCAT CACGCTCGCC
ACCGCGCATC AGGTGCGCGC GGCTTATCAC GGCGGCGTCT CGCGTATTCT CATGGCCAAC
CAGCTGGTCG GCCGTCACAA CATGATGATG GTCGCCGAGT TGCTGAGCGA TCCGGATTTC
GAATTCTTCT GCCTTGTCGA TTCAGTCGAA GGCGTCGAGC AGTTGGGCGA GTTTTTCAAG
TCGGTGAACA AGCAGTTGCA GGTGCTGCTC GAACTCGGCG TGCCGGGCGG CCGCACGGGC
GTGCGCGACG CGGCGCAGCG CAATGCCGTG CTCGATGCCA TTGCACGCTA TCCGGACACG
CTGAAGCTCG CCGGCGTCGA ATTGTATGAA GGCGTGCTCA AGGAAGAACA CGAAGTACGC
GAGTTCCTGC AAAGCGCGGT TGCGGTTACG CGCGAACTCG TCGAGCAAGG CCGTTTTGCG
CGTACGCCGG CTGTGTTGTC AGGCGCGGGC TCGGCCTGGT ACGACGTGGT CGCGGAAGAA
TTCGTGAAGG CTTCGGAGAC CGGCAAGGTA GAAGTCGTGC TGCGCCCCGG CTGCTATCTG
ACGCACGACG TCGGCATCTA TCGCAAGGCG CAGACGGACA TTTTCGCGCG CAATCCGGTC
GCCAGGAAAA TGGGCGAAGG GCTGCTTCCC GCGCTGCAAT TGTGGGCCTA TGTGCAGTCG
ATTCCCGAGC CGGATCGCGC GATCATCGGT CTAGGCAAGC GCGATTCGGC GTTCGACGCC
GGCATGCCGG AACCGGCGCG CCACTATCGT CCGGGCAACG AAGCGCCGCG CGATATTGCC
GCAGGTGAAG GCTGGGAGAT TTTCGGTTTG ATGGATCAAC ACGCGTATCT GCGGATTCCG
GCAGGCGCTG ACCTGAAAGT GGGCGACATG ATCGCGTTCG ACATTTCGCA TCCGTGTCTG
ACGTTCGACA AGTGGCGTCA GGTGTTGGTG GTCGATCCGG CGTATCGCGT CACGGAAGTG
ATCGAAACGT TCTTCTGA
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| Protein sequence | MKVTNYQGAT IDPYSKGLGM VPGTSIQLTD AKRLEWNLLN EDVSLPAAVL YADRVEHNLK
WMQAFVAQYG VKLAPHGKTT MAPQLFRRQL ENGAWGITLA TAHQVRAAYH GGVSRILMAN
QLVGRHNMMM VAELLSDPDF EFFCLVDSVE GVEQLGEFFK SVNKQLQVLL ELGVPGGRTG
VRDAAQRNAV LDAIARYPDT LKLAGVELYE GVLKEEHEVR EFLQSAVAVT RELVEQGRFA
RTPAVLSGAG SAWYDVVAEE FVKASETGKV EVVLRPGCYL THDVGIYRKA QTDIFARNPV
ARKMGEGLLP ALQLWAYVQS IPEPDRAIIG LGKRDSAFDA GMPEPARHYR PGNEAPRDIA
AGEGWEIFGL MDQHAYLRIP AGADLKVGDM IAFDISHPCL TFDKWRQVLV VDPAYRVTEV
IETFF
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