| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0633 |
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| Symbol | |
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| ID | 6282595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 687203 |
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| End bp | 691645 |
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| Gene Length | 4443 bp |
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| Protein Length | 1480 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620198 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001894282 |
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| Protein GI | 187922640 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.461456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.141694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGTG TGCTTGCACG CATCTCGCTG TGTCTGTTCG CATGGCTCTC ATTGGTCGCC
GCGCAAACAA CAGCCGTTGC CCAATCGTTC GACAATCGCT CGAACACTCA GGTTGTCGCC
AATTTTCCCG CGAAACTGAC CGTCGGCGTT CTCGCTAACA GCTGGCTGCC GTTCGACGCC
CTGCAAGACG GCCAACTCAC CGGTATGAGC GTCGACTATC TGCGCGCCCT TGTCGGGCCG
AACGTGGTGA TCGAAGCCAA GGCGTTTCCG GACCTGCCGC AATTGCTTGC CGCCGCTTGC
GCCGGACAGG TCGATCTGCT GACGAGCCTT GCCCGCACCC CCGAGCGCGA GCGGTGCCTG
AGTTTTACCG CGCCTTATTT CCGCTCTTCC TCGTCGGTCG TGGTGCGCCG GGACAGTAAC
AGTTATGGCA ATCCCGCCCA GTTGGCGGGA GCGCGCATCG CGCTAGAAAA AGGTTTTGCG
ATCGAGCGTG TGACACGGGA GCGCTTCCCG CACGCCCAGA TCACCACGTT TGCCGCGACG
CGCGACGCAC TCGCCGCCGT GATCCAGGGC GACGCCGATG TTTATCTCGG CTTCACTGCG
GCCGTGCAAT ATGCCTTGTC CACCGACGAG TTTCGTGGCT TGCGAGTGGC CTTCGAGGAG
AACACCAAAA CTTCCAATTT GCGCTTCGCA GTGCCTCGGA TTCAGACTGC GTTGCGGGAC
CAACTCGATC GGGCGCTCGC GTCGATGAAC CCGGCCGACG AGGCGGCGAT CCGCATGCGC
TGGCTATCCG GCAACTTCGA CGCGAAGCCT GTGCCCGCCA CGCCGCGTCT CGCGCTGACG
CCGCAGGAGC AGGCCTGGCT TCATTCGCTG CCGCCGTTGC AAGTTGGGTT CGATAACAGT
TGGGCGCCCT TCAGTTACGT CGACGGTTCC GGCCGGCCCG CGGGCATTGC CGCCGACTAT
CTGACGTATT TGAGTCGCAC GCTCGGCGTC GTGTTCAATC GCGCAAGTAC GGCTGACTGG
CCCGCCGCGA TCAATTCATT TCAGCGCGGT GAACTCGCGA TCCTCGCCAC CGCTTCGAGT
CACGATCCAC GCCTTACGAA GGCGCGGCAC ACTAGCGCCT ACGAGAGCTA CCCGCTTGTG
CTCGTCGGGC GCGAGGACGA ACCGGCGGCT CGCTCGTTGA ACGATTTTTC GTCACGCCGC
ATTGTCGTTT CGTCGCATGT CGCCGGGGCG CTTGCACTGG CGTTCCAGCG AATTCCGGCG
GACCACGTCG TGGTCGCGCC CAGTCTCGAC GAGGCGCTCA AGATGGTTGA GTCCGGCGAG
GCGGACGTTC TGGTGGGCAA CGTGGCCGCC ACCGATATCC TGCTCAAGCA ACAGTACGGC
GGCGTCCTCA AGATCCTTGG CACGGTTGGC GACTCCGACG CGCTCGACTT TGCCGTACGC
CCGGACCTGA GCCCACTCGC TGGCTTGATC GACCGTGCAT TGCTGGCTAT GCCGCCCGCG
GAAAAGCAGC GCATCCGGCA GAAGTGGGTC ACGGGCAATG CACCGGCGGC AGGCACATGG
AGCGTGACCG CGGTGCGTCT GCTGCCGGTG CTGATCGGCG TCTGCGTCGT GCTGCTGATC
ACCCTGCGTG CCTATCTGTT GCTGCAGCGT GAAGTCCGGC TGCGCAAGAA AACGGAGCGG
GAACTGGAAC TGCAACTGAA CTTCCAGGAA ACGTTGATGA AGACGGTGCC CTATCCGCTC
GTCGCCAAAG ATCTCGACGG CCGTTATCTC GCAGTCAACG AAGCCTATGA GCAAGCCTGC
GGATTGAGCC GCGACGCGGT CGTCGGACGA ACCAGCTTGC AGGTGCAAAC GTGGGGCGAG
GCCAATAGCC GCATCCTGGA CGAGATGACC CGCGAGATGC TGAACGGCGG CGAGACTGCG
CAGGTGGAGT TGCAGTTCGA GCGCGGCGCG GGCAACGTGC GGCATGGCCT TTTCTGGACC
CGAATCTGTC GCGGCAGTGA CGGGCAACCG GCTTGCGTGC TCGGCACGAT GGTCGATATC
ACCGATATCC GGCGCGCTGA AATGCGTGCG CGCGAAACCG AGCGGCGCCT CTTCGACGTG
ACGCGCTCGC TGCCGGCCGT CGTGTTTCAA CTGCGTCGCA CGGCGGATGG AGCGTATACG
TTTCCGTATA TCAGCGGCGA CGCGCGTCAT CTGCTGGGTG GGCGAGGCAG TTTGCAGAAC
GTCAGCGATC AGGTCGATTT CCAACGGGTG TGCGAGGAGG ATCGGGCGTT CGTGCTGGCT
GAACTCGAGC GCTCGGCGCA TAGCGAAACG CCGGTCAACA TGGAGTTCCG TTTCGCCGGC
GACCAGGACA TTAAATGGGC GCGAGCCGAA CTGGTACCGC GCCGCGAATC AGATGGAAGC
GTCGTCTGGA GCGGTTACTG GGTGGACGCC AGCTTGGAGC ACGCGCGCTC CGACGAGCTT
GCGCGAGCGC GCGACCTGGC CGAAGCGGCC TCCCGTGCCA AGGACGATTT CTTCGCCATG
ATGAGCCATG AAATCCGCAC GCCGATGAAC GGCGTGCTCG GGCTCGTGGA AGTGCTCGAG
CGCACGCCGC TCAACGCGGA CCAGGGCGAA ATGCTGGGCA TGATCCATGA GTCGGCGGGT
GCGCTGCTGC AGATTCTCGA CGACCTGCTC GACTATTCGA AAATCGAAGC GGGGCGGTTG
ACCATCGAGG CCGAATCCAT CGACTTACGT GAACTGGTGG ACAACGCTGT CGGCCTGCTG
GCTGGCCGCG CCCATGAAAA GGGCCTGAAA GTGCGCGTGG ATATCGGGCC CGACGTCGCT
GCCACCCTGC GCGGCGACAG TGTCCGACTC CGGCAGATTC TCTTCAACCT GCTAGGCAAC
GCCATCAAGT TTACGCCGCA GGGCGAGGTT GACGTGTGCG TATCGGTCGT TGCGGAAGGC
GACGGCATTC AGACGCTCGA AATGGTCGTC GAGGACACCG GCATCGGCAT CGCGCCAGAA
GTGCAGGCCA AGCTGTTCGA GCCGTTCGTG CAGGCGGAAT CGTCCACCAC ACGGCGTTTC
GGCGGCACGG GCCTCGGTTT GACGATCTGC CGCAAGCTGA TCGATCTGAT GAACGGCTCG
CTCACCTTGC GCAGCGAACC GGGTAGCGGC ACGTGCATGA CCGTGCGGCT CGCCATGCCT
GTCGAGACAC CGCGGTATTC GGTCAACGGC TTGCGCGGCA AACGCGGAAT CGTGGCAACC
GGCGACGCGC GCGTCGCACA GGCGCTGATG CACTTTGGCG AGGCGCTTGG ACTCAAATTG
CGCCACGTCT CGCCTGATGC GCCGGAACTG CACGATCGCG CTGCACTCGC CGAAATCGAT
CTACTGTTCT TGAGTGAAGA TGTGATCTTG CCAGCGGACA TGAGGCCGCG CACGCGATTC
ATCTGTCTGA CCGAGAAGCC GAAGCCGACG GGTTACCGCA TTCTCGACGA CAACGTGCGC
GTCAGCATCA ATCCCATTTC GTGGCGCGGC CTCGGCGCCG CGTGCGCCGC TGCGATGACG
GGGCTGCCGT CGGCGGGGCC TCGATCGGCG GCCATGTCGC GCACGCCGGA ATTCGGCGCT
TCGCCTCCGG ATCGGGAGCG GGCCATTGCC AGTGGGCGGC TGATCCTCGT CGCAGAAGAT
CATCCGGTCA ATCAGGAGTT GATCCGTCAT CAGCTCGCCT TGCTCGGTTT TGCCTGCGAC
GTGGCGAACG ACGGCGCCGA GGCGCTGGCC GCGCTGGAAC ATACGAGTTA TGGCTGTCTG
ATCACGGATT GCCACATGCC GAACGTGTCC GGGTACGAGC TCACGCGCCG TATTCGTGAA
AATGAGCAGG ACGGCGCTTA TCGCCTGCCC ATTCTGGGTA TCACGGCGAA CACCGCGCCC
GAAGACCTGA ATCTGTGCCG TGACGCGGGC ATGGACGATA GTCTCGTGAA GCCGACCCGG
CTCGCCACGC TGCGTGATTA TCTGAGCCGT TGGTTCGGCA CTGACAGCGC GTGGCAAGCC
GCGCCTTCGG AAGCAGTCAG CACGCCGGCG GTCGCTGTGC CTGATGTGCG TGGCGGTGCG
CAACCGTTCG TGCCGGTCGA CCTCGCGCAC ATGACCCAAC TGTGGGGCAG CGAATCGACC
GTCAAGGCTT TGCTCGACTC GTTCGTGTCG TCCGTGCGTG AGGACGTGCA GTCGTTGTCG
CCGTTGCTCG AGCGAGTGGA GTCCGAACGT ACGGAAGTGG AACGTGTGCG CGAGTGGCTT
CATCGCGTGG CGGGGGCGGC GAGCGTCCTG CAATATCCAC CGCTGCTCGA CGCACTTGAA
GACTATCGGC GTGAAATCAC CATCAAACCG CCGGAACGTG TGCGTGATGA CGGGATGCTG
TTAATCGACA AGTGCAATGC CATGCTCGAC GGAATTGAAC AGCAGGCCGC CTTGCTCGTA
TAA
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| Protein sequence | MRRVLARISL CLFAWLSLVA AQTTAVAQSF DNRSNTQVVA NFPAKLTVGV LANSWLPFDA
LQDGQLTGMS VDYLRALVGP NVVIEAKAFP DLPQLLAAAC AGQVDLLTSL ARTPERERCL
SFTAPYFRSS SSVVVRRDSN SYGNPAQLAG ARIALEKGFA IERVTRERFP HAQITTFAAT
RDALAAVIQG DADVYLGFTA AVQYALSTDE FRGLRVAFEE NTKTSNLRFA VPRIQTALRD
QLDRALASMN PADEAAIRMR WLSGNFDAKP VPATPRLALT PQEQAWLHSL PPLQVGFDNS
WAPFSYVDGS GRPAGIAADY LTYLSRTLGV VFNRASTADW PAAINSFQRG ELAILATASS
HDPRLTKARH TSAYESYPLV LVGREDEPAA RSLNDFSSRR IVVSSHVAGA LALAFQRIPA
DHVVVAPSLD EALKMVESGE ADVLVGNVAA TDILLKQQYG GVLKILGTVG DSDALDFAVR
PDLSPLAGLI DRALLAMPPA EKQRIRQKWV TGNAPAAGTW SVTAVRLLPV LIGVCVVLLI
TLRAYLLLQR EVRLRKKTER ELELQLNFQE TLMKTVPYPL VAKDLDGRYL AVNEAYEQAC
GLSRDAVVGR TSLQVQTWGE ANSRILDEMT REMLNGGETA QVELQFERGA GNVRHGLFWT
RICRGSDGQP ACVLGTMVDI TDIRRAEMRA RETERRLFDV TRSLPAVVFQ LRRTADGAYT
FPYISGDARH LLGGRGSLQN VSDQVDFQRV CEEDRAFVLA ELERSAHSET PVNMEFRFAG
DQDIKWARAE LVPRRESDGS VVWSGYWVDA SLEHARSDEL ARARDLAEAA SRAKDDFFAM
MSHEIRTPMN GVLGLVEVLE RTPLNADQGE MLGMIHESAG ALLQILDDLL DYSKIEAGRL
TIEAESIDLR ELVDNAVGLL AGRAHEKGLK VRVDIGPDVA ATLRGDSVRL RQILFNLLGN
AIKFTPQGEV DVCVSVVAEG DGIQTLEMVV EDTGIGIAPE VQAKLFEPFV QAESSTTRRF
GGTGLGLTIC RKLIDLMNGS LTLRSEPGSG TCMTVRLAMP VETPRYSVNG LRGKRGIVAT
GDARVAQALM HFGEALGLKL RHVSPDAPEL HDRAALAEID LLFLSEDVIL PADMRPRTRF
ICLTEKPKPT GYRILDDNVR VSINPISWRG LGAACAAAMT GLPSAGPRSA AMSRTPEFGA
SPPDRERAIA SGRLILVAED HPVNQELIRH QLALLGFACD VANDGAEALA ALEHTSYGCL
ITDCHMPNVS GYELTRRIRE NEQDGAYRLP ILGITANTAP EDLNLCRDAG MDDSLVKPTR
LATLRDYLSR WFGTDSAWQA APSEAVSTPA VAVPDVRGGA QPFVPVDLAH MTQLWGSEST
VKALLDSFVS SVREDVQSLS PLLERVESER TEVERVREWL HRVAGAASVL QYPPLLDALE
DYRREITIKP PERVRDDGML LIDKCNAMLD GIEQQAALLV
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