| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0632 |
|---|
| Symbol | |
|---|
| ID | 6282594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 686402 |
|---|
| End bp | 687148 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642620197 |
|---|
| Product | major intrinsic protein |
|---|
| Protein accession | YP_001894281 |
|---|
| Protein GI | 187922639 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.219434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCGT TAGGTAAGCG GTTGTTATTC GAGGGTGTCG GAACGGCGTG GCTGGTGTTC
GTCGGCTGCG GCAGCATCGT GTTGAACGTC GGTGCGATCC AGCAGGCGGG CGGTGTGCTG
GAAGTCGCGC TGGCATTTGG CCTCGCCCTC GCTACGGCCA TCTATTGCTT CGGCGGCGTG
TCCGGCGGTC ATTTCAATCC CGCTGTCACC GTAGGTTTCA CGGTCGCGCA ACGTTTTCCG
GTCAGGGATC TGCTCCCCTA TATTGCGTCG CAGATTCTCG GTGCGATCGT TGCCGCCGCG
CTACTGCTTT ACGTGGCGGG CGGGCGTCCA GGGTTTGATC TGGCCGCGAG CGAGTTCGCG
GCAAACGGCT TCGGCGACCA TTCTCCTGCC GACTATCAAC TGCATTCTGC GGTGGCCGTC
GAGTTCGTGC TGGCCTTCGG TTTCGTCATG GCAAGCCTGT TGATCGCCCA CAGGCGAGAC
ATGGCGCCGA TCGCGCCGCT GGTCATCGGC GCTTGCCTGG TCCTGGTCTA TCTGGTGTCG
ATTCCGGTGA CCAACGGCTC GGTCAATCCC GCCCGCTCCA CGGCCCAGGC GCTGTTCGTC
GGCGACTGGG CGCTGGATCA GCTTTGGCTG TTCTGGGCCG CGCCGCTGTC GGGCGGTGTC
ATGGCTGGGG CGCTCTTCTC GTTTGTGCAC GGCAAGGCAG ACCTCGCCGC CGCCACGCTC
GCCGACGGGC GCGGCGAAGT TGCCTGA
|
|---|
| Protein sequence | MDALGKRLLF EGVGTAWLVF VGCGSIVLNV GAIQQAGGVL EVALAFGLAL ATAIYCFGGV
SGGHFNPAVT VGFTVAQRFP VRDLLPYIAS QILGAIVAAA LLLYVAGGRP GFDLAASEFA
ANGFGDHSPA DYQLHSAVAV EFVLAFGFVM ASLLIAHRRD MAPIAPLVIG ACLVLVYLVS
IPVTNGSVNP ARSTAQALFV GDWALDQLWL FWAAPLSGGV MAGALFSFVH GKADLAAATL
ADGRGEVA
|
|---|
| |