| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0627 |
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| Symbol | |
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| ID | 6281173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 681210 |
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| End bp | 682097 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642620192 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001894276 |
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| Protein GI | 187922634 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.133406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.406767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC GTGGATTTGA CCTGACGCAG TTGCGGACCT TTGTCGCCGT CGCCGAATCG
GGCAGCGTTT CGGCGGGCGC GGAGCGGGTG TTCCTGTCGC AGTCCTCGGT CAGCGAACAG
TTGAAAAAAC TCGAGGAGCG TGCCGGCCAG CCGCTGTTCG TGCGCAGCAA GCAGGGCGTG
AGCGCCACGC CGGCCGGCAG CCGGCTGCTC GACCACGCGC GGCGCATCAT CGCAATGAGC
GAGGCCGCGT TCGAAGACCT GCAAGGCCGT TCGCTCGACG GCGAATTGCG CATCGCCATC
ACGGACTACT ACCGTCCGCA CGACATCGCG CGCATTCTCA AAACGTTCGC GGAGCAGCAC
CCGCGCCTGA AGCTGCACGT CACGGTGCTG CCGAGCGCGG TAATCGACAG CAACGCGGGC
GACGATGCGT CGTTCGACAT CGGGCTCTCG CTGCGGCTCG TCACCGACAA CGCGCGCGCC
GCGAGCCGCC GCACCGGCGC GCAAAGCACG GTTGTGCGGC GCGAGAAACT GTTGTGGGTC
AGCGCGGCCG ATTCGGGCCC GCGACCGGCC ACGCCCTATT CGCTCGTGTT GCTGCCGTCG
AGCTGCCAGT TGCAGCGCTT TGTCGTGAAG CTGCTGGACG AGCACAAGGT GCCGTACGTG
GTGTCGCACT CCGCATCAGG CGTGGCCGGT TTGCAACTCG CGCTGAAGGC CGGGCTCGGC
ATATCCTGTC TGAACGAATC GTCGATTGGC GGCGGCGTCG TGGCCTGTCC GGCGAGCGTG
GGCTTGCCCG CTTTGCCCGC CGTCGAGTTT CATCTGCTGC CTGGGCGAAT CGGCGAAACC
GAACTCGTCA GCAATGCTCG CACCGCCTTG ATGGCACTTT TCAGTTGA
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| Protein sequence | MTQRGFDLTQ LRTFVAVAES GSVSAGAERV FLSQSSVSEQ LKKLEERAGQ PLFVRSKQGV
SATPAGSRLL DHARRIIAMS EAAFEDLQGR SLDGELRIAI TDYYRPHDIA RILKTFAEQH
PRLKLHVTVL PSAVIDSNAG DDASFDIGLS LRLVTDNARA ASRRTGAQST VVRREKLLWV
SAADSGPRPA TPYSLVLLPS SCQLQRFVVK LLDEHKVPYV VSHSASGVAG LQLALKAGLG
ISCLNESSIG GGVVACPASV GLPALPAVEF HLLPGRIGET ELVSNARTAL MALFS
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