Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0613 |
Symbol | |
ID | 6281727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 665754 |
End bp | 667175 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642620178 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001894262 |
Protein GI | 187922620 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0274336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCA GCCGCATGCA CACCAAGGAG ACAAAGGTGG CTATCGGTAT CGTCAACTCG GGCGCGCGAC TCGATCGCCT GCCCATCGCG TCATTTCACT GGAAAATTCT CGGACTCATC AGCGCGGGCG CCTTTCTCGA CGCCTTCGAC ATCTATCTCG CGGCCGGCGC GCTCGGCGCG ATGGTGAAAG CGGGCTTCTC GGATCTGAAA CTGAACGCGC TTTTCATCTC GGTGACCTTT CTCGGCATGC TGATCGGCGC GGGCTTTGCC GGTTATCTCG GCGACCGCTT CGGCCGCCGT TCGTCGTATC AGACGAACCT GCTGATCTTT GGCGTTGCGT CGATTGCCGC GTGTTTCGTG CCGAACATGA TGTGGCTGAT CGTATTGCGG CTGATCATGG GCGTCGGCCT CGGCGCCGAA CTGGTGGTCG CTGCCGGCAC CTTGTGCGAA TTCATCCCGC CCGCCTCTCG CGGACGCTGG ACCGCGTTGC TCGCGCTCAT CATCAATTCG GGCTTGCTGG TGTCGACGGC GGTGGGCTAC GTCGTGATTC CGCTTCTGGG CTGGCGCTAT ATGTTCGCGA TCGCCGGCGT CGGCGCGATC ATCGTGTGGG TGCTGCGGCA CCGTATGCCG GAGTCGCCGC GCTGGCTCGA ATCGGTCGGA CGAAGCGAAG AAGCCGAGGC CACCGTCTCC GCCATCGAAA GCGAGGTGCA GCGTCAGAAA GGCCCGTTGC CGCCAGTCGA GCGCACCGAA AGTCTCGAAG TACCGAAAGC GCCGTTCTCC GCGTTGTTCT CGCACGCCAT GCTCGGCCGC ACGCTGGTCG CGATTCTCAC CGCGGTCGCC GTGAATATTT CGGTGTACGG CTTTGTCGCC TGGCTGCCGA CCTTCTTCGT CAAGGAAGGC CTGACCATCG TGCAATCGCT CGGCTTCACG ACGCTGATGG CGTTCGGCGC GCCGGGCGGC GCACTGGTCG GCTTCTTCTG CGCGGACCGC ATCGGCCGGG CACGTGGTCT TGTGATCTTC GCGATCGCCA CGATCGTGGT CGGCTTCATC TATCCGAACA TGCATGCGGG CTGGGCAATC AGCAGCGTCG GCTTCGTGTT GATCACCTGC ATCTACACCG TCACGACGTT GGGCTTGTTC GCCTACATCC CCGAACTCTT TCCGACTGAG CTGCGCTTGC GCGGCACCGG CACGGCCGGC GTATGTGGCC GCGCTGCCTC CATGAGCACG CCGTATCTGG CGGTGCTGCT CTACAGCTCG TTCGGCGTGT CCGGCGTGCT GGCCATGGTG AGCAGCGTCC TCGCGTTGCT GGTGTTCGGG ATTCTGCTGC TGCGTGTGGA AACCAACCAG CATGCGCTTG AACGGATCTC GCCGAGCCTC GACACCGACT CTGATTCGCT ACCCGCTACC CAGCAAGGTT AA
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Protein sequence | MLRSRMHTKE TKVAIGIVNS GARLDRLPIA SFHWKILGLI SAGAFLDAFD IYLAAGALGA MVKAGFSDLK LNALFISVTF LGMLIGAGFA GYLGDRFGRR SSYQTNLLIF GVASIAACFV PNMMWLIVLR LIMGVGLGAE LVVAAGTLCE FIPPASRGRW TALLALIINS GLLVSTAVGY VVIPLLGWRY MFAIAGVGAI IVWVLRHRMP ESPRWLESVG RSEEAEATVS AIESEVQRQK GPLPPVERTE SLEVPKAPFS ALFSHAMLGR TLVAILTAVA VNISVYGFVA WLPTFFVKEG LTIVQSLGFT TLMAFGAPGG ALVGFFCADR IGRARGLVIF AIATIVVGFI YPNMHAGWAI SSVGFVLITC IYTVTTLGLF AYIPELFPTE LRLRGTGTAG VCGRAASMST PYLAVLLYSS FGVSGVLAMV SSVLALLVFG ILLLRVETNQ HALERISPSL DTDSDSLPAT QQG
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