Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0594 |
Symbol | |
ID | 6281084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 645072 |
End bp | 645587 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642620159 |
Product | PTS IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_001894243 |
Protein GI | 187922601 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.11798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00814148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAACGCC ACTCAAATGC CCCAGCGAGG AGAACCCAGG CCACGTTTTC GCCTGTCAAC ATGAATCGTT TAGCCAAATT TCTTCCCCTC GAGAACGTCG TCGTCGGACT GTCGGTCACC AGCAAGAAAC GTGTGTTCGA GCAAGCGGGC CTGATCTTCG AGAACCAGAA CGGCATCGCC CGTAGCACGG TCACTGACAA TCTGTTCGCG CGCGAGCGCC TCGGATCGAC TGGCCTTGGT GAAGGCGTGG CGATTCCGCA TGGCCGGATC AAAGGCTTGA AGCAGCCGCT CGCCGCGTTC GTCCGTCTTG CCGAACCCAT CCCCTTCGAG TCGCCCGACG GTCAGCCGGT CTCGCTGCTC ATCTTCCTGC TCGTGCCCGA ACAGGCCACT CAACAGCACC TCGAAATCCT TTCGGAAATC GCGCAGTTGC TGTCCGATCG CGAAGCCCGC GAGCGCCTGC ATACGGAAGA AGACCGCGAA TCATTGCATC GCCTGCTCAC TCAGTGGCAA CCTTGA
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Protein sequence | MERHSNAPAR RTQATFSPVN MNRLAKFLPL ENVVVGLSVT SKKRVFEQAG LIFENQNGIA RSTVTDNLFA RERLGSTGLG EGVAIPHGRI KGLKQPLAAF VRLAEPIPFE SPDGQPVSLL IFLLVPEQAT QQHLEILSEI AQLLSDREAR ERLHTEEDRE SLHRLLTQWQ P
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