Gene Bphyt_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0593 
Symbol 
ID6281083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp643976 
End bp644944 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content64% 
IMG OID642620158 
ProductHPr kinase/phosphorylase 
Protein accessionYP_001894242 
Protein GI187922600 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID[TIGR00679] Hpr(Ser) kinase/phosphatase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.168277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00537936 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATACGT CCAGCATCAA CGCCCAAAGC ATTTTCGACG ATAACGCCGC CATGCTGAAG 
CTCAGCTGGC TGACGGGGCA TGAAGGCTGG GAGCGCGGCT TTTCTTCGGA ATCGGTCGCC
AATGCCACGT CGAGCGCCGA CCTCGTCGGC CACTTGAACC TGATCCACCC GAACCGGATC
CAGGTGCTCG GCGACGCCGA AATTGATTAC TACAAGCGCC AAACCGACGA AGACCGCTCG
CGCCACATGG CCGAGCTGAT CGCGTTGGAA CCACCGTTTC TGGTGGTGGC GGGCGGCGTC
GCCGCGCCGC CGGAACTGGT CCTGCGCTGC ACGCGTTCGT CCACGCCGCT ATTCACCACG
CCGATGTCCG CCGCCGCGGT GATCGACAGC CTGCGCCTCT ACATGTCGCG CATTCTCGCG
CCGCGCGCCA CGCTGCACGG CGTGTTTCTC GACATCCTCG GCATGGGCGT GCTGCTCACC
GGCGACTCGG GCCTCGGCAA GAGCGAACTC GGGCTGGAAC TGATCAGCCG CGGCCACGGC
CTCGTTGCCG ACGACGCGGT CGATTTCGTG CGCCTCGGTC CCGACTTCGT CGAAGGTCGC
TGCCCGCCGC TGCTGCAAAA TCTGCTGGAA GTGCGCGGCC TCGGCCTGCT CGACATCAAG
ACGATTTTCG GTGAAACCGC AGTGCGCCGC AAAATGAAGC TCAAGTTGAT CGTGCAACTG
GTCCGCCGTC CCGATGGCGA ATTCCAGCGC CTGCCGCTGG AAAGCCAGAC CGTCGACGTG
CTCGGCCTGC CGATCAGCAA GGTCACGATT CAGGTGGCGG CCGGCCGAAA TCTCGCCGTG
CTGGTCGAGG CCGCCGTGCG CAACACGATC CTGCAACTGC GTGGCATCGA CACGCTGCGC
GACTTCATGG ATCGTCAGCG CCTCGCTATG CAAGACCCCG ACAGCCAGTT TCCCGGCAAA
CTGATCTGA
 
Protein sequence
MDTSSINAQS IFDDNAAMLK LSWLTGHEGW ERGFSSESVA NATSSADLVG HLNLIHPNRI 
QVLGDAEIDY YKRQTDEDRS RHMAELIALE PPFLVVAGGV AAPPELVLRC TRSSTPLFTT
PMSAAAVIDS LRLYMSRILA PRATLHGVFL DILGMGVLLT GDSGLGKSEL GLELISRGHG
LVADDAVDFV RLGPDFVEGR CPPLLQNLLE VRGLGLLDIK TIFGETAVRR KMKLKLIVQL
VRRPDGEFQR LPLESQTVDV LGLPISKVTI QVAAGRNLAV LVEAAVRNTI LQLRGIDTLR
DFMDRQRLAM QDPDSQFPGK LI