| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0589 |
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| Symbol | |
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| ID | 6283611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 640315 |
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| End bp | 641145 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620154 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001894238 |
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| Protein GI | 187922596 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.362043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000844173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCAGAGT TGCCAGAAGT TGAGGTTACC CGACGGGGAA TCGAACCGTA TGTGTCCGGG
CGCAAGGTTG AGCGCGTGGA TGTGCGTACG CCCGCATTGC GCTGGCCGAT TCCGGCCGAC
CTTGCGAAAA CCTTGCGCGG CCACGTGGTG CGCAAGGTCG AGCGGCGCGG CAAGTATCTG
CTGTTCGAAA TCGACGCGGG CTGGTTCATC GTGCATCTTG GCATGACTGG GACGCTGCGG
GTGCTGCGCC ACGTGCCGCA TCCGCCGGCC GCGGCGAAAC ACGATCACAT CGACTGGATC
TTCGACGAGT TCATTTTGCG CTATCGCGAC CCGCGGCGCT TCGGCGCGGT GCTGTGGCAT
CCGCGCGAAG CCGGCGACGT GCTCGAGCAT CCGCTGCTCG CGAGTCTCGG CGTCGAACCG
TTTTCGCCCG CGTTTTCCGG CGCGCTAATG CACCGGCTCA CGCGCGGGCG CAAAGTCTCG
GTGAAGCAGG CGCTGCTGGC GGGTGAAATC GTGGTGGGCG TGGGCAATAT CTACGCATCG
GAGAGCCTGT TTCGCGCCGG CATCCGGCCG ACCACCGCGG CGGGGCGCGT CTCGCTCGTG
CGTTACGAGC TGTTGGCGGA CGCCGTGCGC GTGACGCTCG CCGCCGCGAT CGAGAAGGGA
GGCAGCACGT TGCGCGACTT CGTCGGCAGC AACGGCGAAA GCGGTTACTT CCAGCTCGAC
TATTTCGTCT ATGATCGCGC GGGACTGCCA TGCCGCGTGT GTGGAACGCC GATCAAACAG
ATCGTGCAAG GGCAGCGTTC AACGTATTTC TGTCCCACCT GCCAGCGCTA A
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| Protein sequence | MPELPEVEVT RRGIEPYVSG RKVERVDVRT PALRWPIPAD LAKTLRGHVV RKVERRGKYL
LFEIDAGWFI VHLGMTGTLR VLRHVPHPPA AAKHDHIDWI FDEFILRYRD PRRFGAVLWH
PREAGDVLEH PLLASLGVEP FSPAFSGALM HRLTRGRKVS VKQALLAGEI VVGVGNIYAS
ESLFRAGIRP TTAAGRVSLV RYELLADAVR VTLAAAIEKG GSTLRDFVGS NGESGYFQLD
YFVYDRAGLP CRVCGTPIKQ IVQGQRSTYF CPTCQR
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