| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0587 |
|---|
| Symbol | lolB |
|---|
| ID | 6283609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 637754 |
|---|
| End bp | 638386 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642620152 |
|---|
| Product | outer membrane lipoprotein LolB |
|---|
| Protein accession | YP_001894236 |
|---|
| Protein GI | 187922594 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.178798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00290914 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTT CCCGTCTGAT TTATTTTCCC CGGGCACCGC GCGGCGCGGC GCTCGCTTTC
ACTGCGGCAG CGGTGGTCGC CTTGGCCGGT TGTGCGTCGG TCAAACCGCA AGGGCCGTCC
ACGTCGAATG CCGCGACCTC CGTCACCGCG CAGACTAGCC GTGCTTACCA GGGCCGTTTC
GCGGTTCAGT ACAACGATCA GAACGGCCAG CAGCGCAACG CTTACGGCAA CTTCACCTGG
CAGGAAACCG GCGACACCGT GACCCTGCAG TTGCGCAACC CGCTCGGCCA GACGCTGGCG
GTGGTGACGT CGTCGCCGGC TTCGGCAACG CTGGAGCTGC CGAACCGCCA GCCGCTCACC
GCGGATAACG TCTCCACGCT GATGCAGAAT GCGCTCGGCT TCGCGTTGCC GGTCGAAGGG
CTGCGCTATT GGCTTCAACC GTCGCCGGCG CCCACTTCGC GCGCCAGGAC CGAGAAGGAT
CCCGAGCAAC CGTCGCGGCT GAAACAAATC ACACAGGACG GCTGGACAAT CGACTATCTG
GCTTATGCCG ACGCGCCGGC AATCGGCGTG AAGCGAGTCA ACCTGAGTCG TTCGGAACCG
CCGCTCGACA TCAAGCTCGT GCTGGATCAG TAA
|
|---|
| Protein sequence | MRLSRLIYFP RAPRGAALAF TAAAVVALAG CASVKPQGPS TSNAATSVTA QTSRAYQGRF
AVQYNDQNGQ QRNAYGNFTW QETGDTVTLQ LRNPLGQTLA VVTSSPASAT LELPNRQPLT
ADNVSTLMQN ALGFALPVEG LRYWLQPSPA PTSRARTEKD PEQPSRLKQI TQDGWTIDYL
AYADAPAIGV KRVNLSRSEP PLDIKLVLDQ
|
|---|
| |