| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0586 |
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| Symbol | ipk |
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| ID | 6283056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 636794 |
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| End bp | 637675 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642620151 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001894235 |
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| Protein GI | 187922593 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.193367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00322151 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGAAA CGACCGATTC GCTGCGCGAT TGCCTCGCTC CAGCGAAACT CAACCTCTTC
CTGCACATCA CCGGCCGCCG GCCTGATGGC TATCACACGC TGCAAACGGT CTTCCAGTTG
CTCGACTGGG GCGACACGCT GCACTTCACG CGACGTGACG ACGGACTCAT CACGCGCAGC
ACCGAAATCG CCGACGTGCC GCCGGAACAC GACCTGACCG TGCGCGCCGC GACACTGCTC
AAAGCGCATA CGGGCTCGCC TGAAGGCGTC GATATCGAAA TCGACAAGCG GCTGCCGATG
GGCGCCGGCC TTGGCGGCGG CAGCTCTGAT GCTGCGACGA CGCTGCTCGC CCTGAATCGT
TTGTGGAAGC TCAATCTGCC GCGCCTCGAA TTGCAGGCGC TGGCATTGAA ACTTGGCGCC
GATGTGCCGT TTTTTGTTTT CGGAAAAAAT GCGTTCGCCC AGGGTGTCGG AGAAGCTTTA
GACGTTGTAC AATTGCCGCC GCGCCATTTC TTAGTAGTGA CGCCGAGGGT TCATGTTCCG
ACTGCAGCGA TTTTTTCTGA AAAAGCGTTG ACAAGAGATT CAAAACCCCT CACAATTACG
GACTTTCCTG CAGAACTTAG CTGCAACACT GAATGGCCAG AAAGTTTCGG CCGCAATGAC
ATGCAGCAGG TTGTCGTAGG AAAATACGCG GAAGTAGCGC AAGTGTTGCG ATGGTTTGAA
AACGTCGCGC CAGCGCGGAT GTCTGGATCA GGTGCAAGTG TTTTTGCCGC GTTCCGCAGT
AAAGCTGAAG CAGAAGCGGC GCAAGCCAAA CTGCCAGCCG AATGGAACAG CGCAGTGACT
GCAAGTCTCG ATCAGCATCC ACTCTTTACT TTCGCGTCAT AA
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| Protein sequence | MIETTDSLRD CLAPAKLNLF LHITGRRPDG YHTLQTVFQL LDWGDTLHFT RRDDGLITRS
TEIADVPPEH DLTVRAATLL KAHTGSPEGV DIEIDKRLPM GAGLGGGSSD AATTLLALNR
LWKLNLPRLE LQALALKLGA DVPFFVFGKN AFAQGVGEAL DVVQLPPRHF LVVTPRVHVP
TAAIFSEKAL TRDSKPLTIT DFPAELSCNT EWPESFGRND MQQVVVGKYA EVAQVLRWFE
NVAPARMSGS GASVFAAFRS KAEAEAAQAK LPAEWNSAVT ASLDQHPLFT FAS
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