Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0576 |
Symbol | |
ID | 6281151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 628472 |
End bp | 629170 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642620140 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001894225 |
Protein GI | 187922583 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.534036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00970837 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTACG TATTTGCACC CGCACCGGTG GTCGCGGTGC CGGTTGTGGG GTCCAGCGAG CAGTTCGCGG TGCGTCGCAT CTACTGTGTT GGCCGTAACT ACGAGGCGCA CGCGCGCGAG ATGGGCCACG ATCCCGACCG CGAACCGCCG TTCTTCTTCG CCAAGCCGGC CGATGCCGTG CTGTGCGTCG CGCCCGGCGC CACTGGCGAG TTTCCGTATC CGTCGCTGTC GAAAAACGTC CACTTCGAGA TGGAAATGGT GGCGGCGATC GGCAAGGGCG GCAAGAATAT TCCGGTCGAG AGCGCGCTCG ACCACGTGTA CGGTTACGCG CTCGGTCTCG ACATGACGCG CCGCGATCTG CAGGCCGAAG CGAAAAAGCT GGGCCGTCCC TGGGATACCG CGAAGGGCTT CGACCACTCG GCGCCGCTCG GCCCGATTCA TCCGGCGGCG ACGGTCGGCC ATGTCGACAA GGGCGCGATC TGGCTGTCGG TGAACGGCGA GGAAAAGCAA AGCTCGGACG TGTCGCAACT GATCTGGTCG GTGGCCGAGA CGATCGCTTA TCTGTCGACG CTGTTCGAAC TGCAACCCGG CGACCTGATC TTCACCGGCA CGCCGGAAGG CGTCGGCGCA GTGGTGTCGG GCGATCTGAT GAAGGGTGGC GTGGATGGGC TCGGCGAGCT CTGCGTGCGC GTCGTCTGA
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Protein sequence | MSYVFAPAPV VAVPVVGSSE QFAVRRIYCV GRNYEAHARE MGHDPDREPP FFFAKPADAV LCVAPGATGE FPYPSLSKNV HFEMEMVAAI GKGGKNIPVE SALDHVYGYA LGLDMTRRDL QAEAKKLGRP WDTAKGFDHS APLGPIHPAA TVGHVDKGAI WLSVNGEEKQ SSDVSQLIWS VAETIAYLST LFELQPGDLI FTGTPEGVGA VVSGDLMKGG VDGLGELCVR VV
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