Gene Bphyt_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0576 
Symbol 
ID6281151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp628472 
End bp629170 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID642620140 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001894225 
Protein GI187922583 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.534036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00970837 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTACG TATTTGCACC CGCACCGGTG GTCGCGGTGC CGGTTGTGGG GTCCAGCGAG 
CAGTTCGCGG TGCGTCGCAT CTACTGTGTT GGCCGTAACT ACGAGGCGCA CGCGCGCGAG
ATGGGCCACG ATCCCGACCG CGAACCGCCG TTCTTCTTCG CCAAGCCGGC CGATGCCGTG
CTGTGCGTCG CGCCCGGCGC CACTGGCGAG TTTCCGTATC CGTCGCTGTC GAAAAACGTC
CACTTCGAGA TGGAAATGGT GGCGGCGATC GGCAAGGGCG GCAAGAATAT TCCGGTCGAG
AGCGCGCTCG ACCACGTGTA CGGTTACGCG CTCGGTCTCG ACATGACGCG CCGCGATCTG
CAGGCCGAAG CGAAAAAGCT GGGCCGTCCC TGGGATACCG CGAAGGGCTT CGACCACTCG
GCGCCGCTCG GCCCGATTCA TCCGGCGGCG ACGGTCGGCC ATGTCGACAA GGGCGCGATC
TGGCTGTCGG TGAACGGCGA GGAAAAGCAA AGCTCGGACG TGTCGCAACT GATCTGGTCG
GTGGCCGAGA CGATCGCTTA TCTGTCGACG CTGTTCGAAC TGCAACCCGG CGACCTGATC
TTCACCGGCA CGCCGGAAGG CGTCGGCGCA GTGGTGTCGG GCGATCTGAT GAAGGGTGGC
GTGGATGGGC TCGGCGAGCT CTGCGTGCGC GTCGTCTGA
 
Protein sequence
MSYVFAPAPV VAVPVVGSSE QFAVRRIYCV GRNYEAHARE MGHDPDREPP FFFAKPADAV 
LCVAPGATGE FPYPSLSKNV HFEMEMVAAI GKGGKNIPVE SALDHVYGYA LGLDMTRRDL
QAEAKKLGRP WDTAKGFDHS APLGPIHPAA TVGHVDKGAI WLSVNGEEKQ SSDVSQLIWS
VAETIAYLST LFELQPGDLI FTGTPEGVGA VVSGDLMKGG VDGLGELCVR VV