| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0573 |
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| Symbol | |
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| ID | 6281148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 625654 |
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| End bp | 626763 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620137 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001894222 |
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| Protein GI | 187922580 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.747209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0181569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAAA ACCCCGCTGA GAAATACCGC CCCTTCCCCG CCGTCCGTCT GACCGGCCGC
AAATGGCCGA GCCGCACGAT CGACCAGACG CCGGTCTGGA TGAGCACCGA TCTGCGCGAC
GGCAATCAGG CGCTGATCGA GCCAATGAAC GCCGCGCAAA AGCTCGAGTT CTTCGAGATG
CTGGTGGCGA TCGGTTTCAA GGAGATCGAG GTCGGCTATC CGTCGGCATC GCAAATGGAT
TTCGATTTCG TCCGCAAGCT GATCGAGGAG AAACGCATTC CAGACGACGT GACCATCGAG
GTGTTCATGC CGTCGCGCGC GGAACTGATT GCGCGCACGT TCGAGGCGCT GGAAGGCGCG
CCGCGCGCCA TCGTGCACTT GTACAACGCG ATCTGCCCGT CGTTCCGGCG GATCGTGTTC
AACCAGACGA AGGCCGAGAT CAAGGCGCTG GCCGTGCACG GCACGCAAAT CATCAAGGAG
CATGCGCAGG CGCGCCCCGG CACGCACTGG ACTTTCCAGT ACTCGCCGGA AACGTTCAAT
GCCACCGAAT TGCCGTTTGC ACGCGAGGTG TGCGACGCGG TCGCGCAGAC GTGGCGGCCG
ACGCGCGATC ACAAAATGAT CGTCAACCTG CCCGCGAGCG TGGAAGCGGC GACACCGAAT
GTGTTCGCCG ATCAGATCGA ATGGATGCAC CGCAATCTCG GCTATCGCGA CAGCATTGTG
CTGTCGGTGC ATCCGCACAA CGATCGCGGC ACCGCTGTGG CCGCCGCGGA ACTGGCGCTG
CTGGCTGGCG CGGACCGCGT CGAAGGCTGC CTGTTCGGCA ACGGCGAGCG CACCGGCAAC
GTCGATCTCG TCGCGCTGGC AATGAATCTG GCTGCGCAAG GCGTCGATAC TGGGCTCGAT
TTCTCGAATA TGGAGGCGGT CCGGCGCGTG GTAGAGCGCT GCAATCAGCT GCCGGTGCAT
CCGCGGCATC CGTATGCGGG CGAGGCGATG ATGCGGGCGA AGAACGCGGA GCGACAAGGC
GTCGCGGCGC AAGAGCCCAT AGCGGCCGAA ACTGGCGCGG CGGATCGTCA CGAATGGAGC
GGTGTGGATC AGGAGAGCGT GGCTGCCTGA
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| Protein sequence | MLQNPAEKYR PFPAVRLTGR KWPSRTIDQT PVWMSTDLRD GNQALIEPMN AAQKLEFFEM
LVAIGFKEIE VGYPSASQMD FDFVRKLIEE KRIPDDVTIE VFMPSRAELI ARTFEALEGA
PRAIVHLYNA ICPSFRRIVF NQTKAEIKAL AVHGTQIIKE HAQARPGTHW TFQYSPETFN
ATELPFAREV CDAVAQTWRP TRDHKMIVNL PASVEAATPN VFADQIEWMH RNLGYRDSIV
LSVHPHNDRG TAVAAAELAL LAGADRVEGC LFGNGERTGN VDLVALAMNL AAQGVDTGLD
FSNMEAVRRV VERCNQLPVH PRHPYAGEAM MRAKNAERQG VAAQEPIAAE TGAADRHEWS
GVDQESVAA
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