| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0570 |
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| Symbol | |
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| ID | 6284685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 623239 |
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| End bp | 624174 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642620134 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001894219 |
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| Protein GI | 187922577 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.634272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0160138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCATG CAATGACCCT TCCGAGTACT TTGAGCCCGT CGTCGGCTAA GGCCGCTTCG
GCAGGTGCAC TGGCGCTCTC GCATTCCTCG CTGCTGCCCG GTCAACTGGG CAATATCGAC
GCCTACATCC AGGCCGTTAA TCGGATTCCG ATGCTGACGC CGGCGGAAGA ACGCCAGTTC
GCCACCGAAT TTCGCGAGCA GGACAACCTC GAGTCCGCGC GCCGTCTCGT GCTGTCGCAC
TTGCGGCTGG TCGTGTCGAT CGCGCGCAAC TATCTGGGTT ATGGACTGCC GCACGCCGAC
CTGATCCAGG AAGGCAACAT CGGCCTGATG AAGGCCGTGA AGCGCTTCGA TCCGGAGCAG
AACGTGCGCC TCGTGTCGTA CGCCATGCAC TGGATCAAGG CTGAGATCCA CGAATACATT
CTGCGCAACT GGCGGATGGT GAAGGTCGCC ACCACCAAGG CGCAGCGCAA GCTGTTCTTC
AATCTGCGCA GCCATAAGCA AGGGCTGGGC GCGTTCACGC CGGACCAGAT CGACGATCTG
GCCAAAGAAT TGAACGTGAA GCGCGAAGAA GTCTCCGAAA TGGAAACGCG CCTCTCCGGC
GGCGACATCG CGCTGGAAGG TCAGGTCGAA GACGGTGAAG AAGCGTACGC GCCGATCGCC
TATCTGGCCG ACTCGCATAG CGAACCGACT GCCGTGCTGG CTTCGCGTCA GCGCGACAAG
CTGCACAGCG ACGGTATCGC GAGCGCGCTG GACGCACTTG ACGCCCGCAG CCGCCGCATC
ATCGAGGCAC GCTGGCTGAA GGTGGAAGAC GACGGTTCGG GCGGCTCCAC GCTGCACGAA
CTGGCCGACG AGTTCGGCGT GTCCGCCGAA CGTATTCGGC AGATCGAGGC GAGCGCAATG
AAGAAGATGC GCGGTGCGCT GACCGAATAC GCGTAA
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| Protein sequence | MSHAMTLPST LSPSSAKAAS AGALALSHSS LLPGQLGNID AYIQAVNRIP MLTPAEERQF
ATEFREQDNL ESARRLVLSH LRLVVSIARN YLGYGLPHAD LIQEGNIGLM KAVKRFDPEQ
NVRLVSYAMH WIKAEIHEYI LRNWRMVKVA TTKAQRKLFF NLRSHKQGLG AFTPDQIDDL
AKELNVKREE VSEMETRLSG GDIALEGQVE DGEEAYAPIA YLADSHSEPT AVLASRQRDK
LHSDGIASAL DALDARSRRI IEARWLKVED DGSGGSTLHE LADEFGVSAE RIRQIEASAM
KKMRGALTEY A
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