Gene Bphyt_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0567 
Symbol 
ID6284682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp619886 
End bp621022 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content62% 
IMG OID642620131 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_001894216 
Protein GI187922574 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.103101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACG CAACCCTCAA ACTGATCTGG TGGGTGCTGA TCGGCGTGCT GCTGATCGGC 
TTCGCGCTCA CCGACGGCTT CGACATGGGC GCGGCGATTC TGCTGCCGTT CATCGGCAAG
ACCGACGCCG AGCGGCGCAT TGTCGTGAAC ACGGTAGGCG CGACGTGGGA AGGCAATCAG
GTCTGGCTCA TCACGGCGGG CGGCGCAATG TTCGCGGCGT GGCCGCTGGT GTACGCGGCG
TCGTTCTCCG GCTTCTATTT CGCCATGCTG CTGGTGCTGT TCGCACTGTT CTTCCGGCCG
GTCGGCTTCG ACTATCGCAG CAAACGCGAA GACCCGCGCT GGCGTACGGC ATGGGACTGG
GCGCTGTTCG TCGGCGGTTT CGTGCCGGCA CTGGTGTTCG GCGTCGCGTT CGGCAACCTG
TTGCAAGGCG TGCCGTTCTC GTTCGATACC GACCTGCGCG TCACGTATCA CGGCGGCTTC
TTCGAGTTGC TCAACCCGTT CGCGGTGTTG TGCGGCCTCG TCAGCGTCTC GATGCTGGCC
GCGCACGGCG CCGCCTTCGT CAAGATGAAA GCGGACGACA TTGTCGCCGA ACGCGCTTCG
CTGGCGCTTC GAATTGCGTC ATTCGCGACC GTGGTGCTGT TCCTGATCGC CGGCGCGCTG
ATCGCCACGA TGATCGGCGG CTACCAGGTG ATCGACGCAC CGCCGCTCGA CATGGTCGCC
AATCCGTTGA TGAAGAACGT GATCGGCGCA CCGGGGCTGT GGCTGACCAA CTACGCGAAC
TATCCGTGGA TGGTGAGCGC GCCGGTAGTG GGTCTCGTGG GCGGCGTGCT GGCCACGTTG
CTTGCACGCT CGCGCTTCGA GAAAAGCGCC TTTCTGTCGA CCTCGCTGAT GATCATCGGC
GTGATCCTGA CGGCGGGCTT CTCGATGTTT CCGTTCATCA TGCCCTCCTC GCTCGATGGC
CGCAGCAGCC TCACCGTGTG GGATTCGACC TCGAGCCGCA TGACGTTGCA GATCATGTTG
ATCGCCGTGA TCATTTTCCT GCCGATCATC CTGATCTACA CGAGCTGGGT GTATCGCGTG
ATGCGCGGCA AGGTGACTGC CGCCGCACTC GAAGAAAACC ACCATACGAT GTATTGA
 
Protein sequence
MDYATLKLIW WVLIGVLLIG FALTDGFDMG AAILLPFIGK TDAERRIVVN TVGATWEGNQ 
VWLITAGGAM FAAWPLVYAA SFSGFYFAML LVLFALFFRP VGFDYRSKRE DPRWRTAWDW
ALFVGGFVPA LVFGVAFGNL LQGVPFSFDT DLRVTYHGGF FELLNPFAVL CGLVSVSMLA
AHGAAFVKMK ADDIVAERAS LALRIASFAT VVLFLIAGAL IATMIGGYQV IDAPPLDMVA
NPLMKNVIGA PGLWLTNYAN YPWMVSAPVV GLVGGVLATL LARSRFEKSA FLSTSLMIIG
VILTAGFSMF PFIMPSSLDG RSSLTVWDST SSRMTLQIML IAVIIFLPII LIYTSWVYRV
MRGKVTAAAL EENHHTMY