| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0564 |
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| Symbol | |
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| ID | 6284434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 616295 |
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| End bp | 618070 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620128 |
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| Product | PTS system, N-acetylglucosamine-specific IIBC subunit |
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| Protein accession | YP_001894213 |
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| Protein GI | 187922571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.499479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.229246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGGA ATCCGTTTCT GAAGATTCAG CGCCTGGGAC GCGCGCTGAT GCTGCCGATT
GCAGTGCTGC CGGTTGCCGG CCTGCTGCTG CGCCTCGGCC AGCCCGATGT GTTCAACATC
AAGATGATCG CCGACGCCGG CGGCGCGATC TTCGACAACC TGCCGCTGCT GTTCGCGATC
GGCGTGGCGG TCGGCTTCGC GAAAGACAAT AACGGCGTGG CGGGTCTGGC GGGTGCGATC
GGCTATCTGA TCGAAGTCGC GGTGATGAAG GACATCAACG ACAAGCTCAA CATGGGCGTG
TTGTCCGGGA TCGTGGCGGG TATCGTCGCG GGCTTGCTGT ACAACCGGTA CAAAGACATC
AAGCTGCCCG ATTACCTCGC TTTCTTCGGA GGGAAACGCT TCGTGCCGAT TGTCACGGGG
GTGGTCTGTC TCGTGCTCGG CATAGCGTTC GGCTACGTAT GGCAACCGGT GCAAGCCGTT
ATCGATACGG CCGGCCACTG GCTGACCACC GCGGGCGCGC TCGGCGCATT CGTGTTCGGC
GTGCTGAACC GCTTGCTGCT CGTCACGGGC TTGCATCACA TCCTCAATTC GCTGACGTGG
TTCGTGTTCG GCACGTTCAC GCCGCCGGGC GGCGCTGCCG TGACGGGCGA CCTGCATCGC
TTCTTCGCGG GCGACCCGAC TGCGGGCACC TTCATGACGG GCTTCTTCCC GGTCATGATG
TTCGGTCTGC CGGCTGCCTG TCTCGCGATG TTCCATGAAG CACCGAAGGA GCGCCGCGCG
GTTGTGGGCG GTTTGCTCTT CTCGATGGCG CTGACCTCGT TCCTGACGGG CGTGACCGAG
CCGATCGAAT TCAGCTTCAT GTTCCTCGCA CCGGTGCTGT ACGTGATCCA CGCGCTGTTG
ACGGGTATCT CGCTCGCCAT CTGCTCGGCG CTCGGCATTC ACCTCGGCTT CACCTTCTCC
GCGGGCGCAA TCGACTACGT GTTGAACTAC GGTCTGTCGA CTCGCGGCTG GTGGGCGATT
CCGATCGGTC TCGTCTATAT GGTGGTGTAC TACGGTCTGT TCCGCTTCTT CATCCGCAAG
TTCAATATGG CGACGCCGGG CCGCGAACCC GCCGCAGCCG ATGAGCAAGT CGACTCGTTT
GCCGCGGGTG GTTTTGTTTC GCCGGTCGCC GGTACGGCTG TGCCGCGTGC GCAGCGTTAT
ATCGCTGCGC TGGGCGGCGC ATCGAATCTG TCGGTGGTGG ATGCTTGCAC GACGCGTTTG
CGTTTGTCGG TGGTCGATTC GAACAAGGTT TCGGAAAACG AACTGAAGAC GATCGGCGCG
CGCGGCGTGC TCAAGCGCGG CTCGACCAAC GTGCAGGTGA TCATCGGACC GGAAGCGGAC
ATCATCGCGG ACGAAATCCG TACGGTGATC GCGCAAGGTG GTGGTGATGC GGTGAAGCCG
GCGGCTGCTG CTCCGGCTCA GGTTGTGGCG GCTGCGCCGG TTGCGGCTTC GGTCGCTCAA
GGTAGCGGTC CGCTCGATCC GGATCCGCTG CGCTGGCTTG CCGTGTTCGG CGGTGCGGGC
AACGTGCTGT CGCTGGATGC GATCGCGGCG ACGCGTCTGC GTATCGTCGT GCGCGATCCG
TCGGCGGTTG ATCGTCAACG CCTGGCGACG CTCGATACGG CATGGATTTC TGCTGACACG
TTCCATATCG TCGTCGGCGA TGCGGCGCAA CGCTATGCTG AAAAGCTGGC GACGCGCACG
ACGCAAAGCG GCGGTGCAAC GCCGCTGCCC GCATAA
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| Protein sequence | MDGNPFLKIQ RLGRALMLPI AVLPVAGLLL RLGQPDVFNI KMIADAGGAI FDNLPLLFAI
GVAVGFAKDN NGVAGLAGAI GYLIEVAVMK DINDKLNMGV LSGIVAGIVA GLLYNRYKDI
KLPDYLAFFG GKRFVPIVTG VVCLVLGIAF GYVWQPVQAV IDTAGHWLTT AGALGAFVFG
VLNRLLLVTG LHHILNSLTW FVFGTFTPPG GAAVTGDLHR FFAGDPTAGT FMTGFFPVMM
FGLPAACLAM FHEAPKERRA VVGGLLFSMA LTSFLTGVTE PIEFSFMFLA PVLYVIHALL
TGISLAICSA LGIHLGFTFS AGAIDYVLNY GLSTRGWWAI PIGLVYMVVY YGLFRFFIRK
FNMATPGREP AAADEQVDSF AAGGFVSPVA GTAVPRAQRY IAALGGASNL SVVDACTTRL
RLSVVDSNKV SENELKTIGA RGVLKRGSTN VQVIIGPEAD IIADEIRTVI AQGGGDAVKP
AAAAPAQVVA AAPVAASVAQ GSGPLDPDPL RWLAVFGGAG NVLSLDAIAA TRLRIVVRDP
SAVDRQRLAT LDTAWISADT FHIVVGDAAQ RYAEKLATRT TQSGGATPLP A
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