Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0558 |
Symbol | |
ID | 6284057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 608519 |
End bp | 609331 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642620122 |
Product | lipoprotein, YaeC family |
Protein accession | YP_001894207 |
Protein GI | 187922565 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.357264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCA GAAATATCCT CAAAGCCCTC TCGGCAGTCA TCGCCACGAC GGCAATCTTC ACCAGCTTCG GCGCGCACGC CGACGACAAA GTCATCAAGG TCGGCACGAT CGGCGGCCCG GACGCGCAAA TCTGGGAAGT CGTCACCAAA GTGGCGAAGC GCGAAGGCCT GAACGTGAAG GTCGTCGAAT TCAACGACTA CGTGCAGCCG AACGCTGCGC TCGACGCAGG CGACCTCGAC GCGAACAGCT TCCAGCACCA GCCGTACCTC GATAGCCAGA TCAAGCAACG CGGTTACAAG ATCGTCAACG CCGGCCTCAC GTACATCTCG CCGCTCGGCA TCTATTCGAA GAAGCTGAAG TCGCTGAAGG ATCTGCCGCA AGGCGCGAAG GTCGCGGTGC CGAACGATCC GTCGAACGAA AACCGCGCAT TGCTGTTGCT GCAAACGCAA GGCGTGCTCA AGCTGAAGAC CGGCGCGGGC ACCAACGGCA ATAACGCGAC GGCTCTCGAC GTCGCCGACA ACCCGAAGAA GATCAAGCTG GTCGAACTCG ACGCCGCGCA ACTGCCGCGC TCGCTGTCGG ACGTCGATGC CGCCGCGATC AACACGAACT TCGCGTTGGC CGCCGGCTTG CAGCCGACCA AAGATGCGAT CGCGCTCGAA GACGTGCATA GCCCGTACGC GAACCTGATC GCCGTGCGCA CGCAAGATAA GGACAAGCCG TGGGTCAAGA AGCTGGTTGC TGCTTACCAG TCGGAAGACG TGCGTCAGTT CATCAAGACG CAGTTCAAGG GTTCGGTGGT GCCGTCGTTC TAA
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Protein sequence | MQRRNILKAL SAVIATTAIF TSFGAHADDK VIKVGTIGGP DAQIWEVVTK VAKREGLNVK VVEFNDYVQP NAALDAGDLD ANSFQHQPYL DSQIKQRGYK IVNAGLTYIS PLGIYSKKLK SLKDLPQGAK VAVPNDPSNE NRALLLLQTQ GVLKLKTGAG TNGNNATALD VADNPKKIKL VELDAAQLPR SLSDVDAAAI NTNFALAAGL QPTKDAIALE DVHSPYANLI AVRTQDKDKP WVKKLVAAYQ SEDVRQFIKT QFKGSVVPSF
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