Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0554 |
Symbol | |
ID | 6284053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 604244 |
End bp | 605149 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620118 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_001894203 |
Protein GI | 187922561 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.175384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.802361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGCA CAACACTCTC CCAAACGCCC GGTAGCCGGG TCTCCCAGTA CATCGCCCTG ACGAAGCCGC GCGTCACGCA ACTCGCCGTG TTCTGCGCTG TCATCGGCAT GTTTCTGTCG ACGCCTGGCA TGGTGCCCTG GACTCCGCTG ATCGGCGGTA CCGTGGGCAT CTGGTTGCTG GCCGGCGCGG CGTTCGCCAT CAATTGCCTT GTCGAGCAGA AAATCGACGC CAAGATGCGC CGCACCTCGT GGCGTCCGTC CGCGCGCGGT GAGATCACCA CCGCGCAGAT TCTGCTGTTC TCGGCCGTGC TTGGCGGCCT CGGCATGTGG ACGCTCTACA CGTTCGCCAA TCCGCTTACC ATGTGGCTCA CGCTGGCTAC GTTCGTGGGC TATGCCGTCA TCTATACGCT GTTGCTCAAG CCTGCCACGC CGCAGAACAT CGTGATCGGC GGCGCCTCGG GCGCCATGCC GCCGGCGCTC GGCTGGGCCG CGGTCACCGG CCACGTGCCG GGCGACGCCT GGATCCTGGT GCTGATCATC TTCGTGTGGA CGCCGCCGCA TTTCTGGGCG CTCGCGCTGT ATCGCCGCAA AGACTACGAA AACGCCGGCC TGCCGATGCT GCCGAACACG CACGGCGAGA AGTACACGCG CCTGCATATC CTGCTGTACA CGGTGATCCT GTTCGCGGTC ACCATGATGC CCTTCATCTC CGGCATGAGC GGCGTGGTGT ATCTCGCGGC GGCCGTGCTG CTGGGTGCCG TGTTTCTTGC CTATGCGTGG AAGATCTATC GCGAGTACTC GGACGATCTG GCGCGCAAGA CCTTCCGTTA TTCGATCGTC TATCTCTCGC TGCTGTTCGC CGCGCTGCTG ATCGATCACT ATGCGCGCGT CGTGATCGGC GCGTAA
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Protein sequence | MDSTTLSQTP GSRVSQYIAL TKPRVTQLAV FCAVIGMFLS TPGMVPWTPL IGGTVGIWLL AGAAFAINCL VEQKIDAKMR RTSWRPSARG EITTAQILLF SAVLGGLGMW TLYTFANPLT MWLTLATFVG YAVIYTLLLK PATPQNIVIG GASGAMPPAL GWAAVTGHVP GDAWILVLII FVWTPPHFWA LALYRRKDYE NAGLPMLPNT HGEKYTRLHI LLYTVILFAV TMMPFISGMS GVVYLAAAVL LGAVFLAYAW KIYREYSDDL ARKTFRYSIV YLSLLFAALL IDHYARVVIG A
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