Gene Bphyt_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0554 
Symbol 
ID6284053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp604244 
End bp605149 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content64% 
IMG OID642620118 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_001894203 
Protein GI187922561 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.175384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.802361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCA CAACACTCTC CCAAACGCCC GGTAGCCGGG TCTCCCAGTA CATCGCCCTG 
ACGAAGCCGC GCGTCACGCA ACTCGCCGTG TTCTGCGCTG TCATCGGCAT GTTTCTGTCG
ACGCCTGGCA TGGTGCCCTG GACTCCGCTG ATCGGCGGTA CCGTGGGCAT CTGGTTGCTG
GCCGGCGCGG CGTTCGCCAT CAATTGCCTT GTCGAGCAGA AAATCGACGC CAAGATGCGC
CGCACCTCGT GGCGTCCGTC CGCGCGCGGT GAGATCACCA CCGCGCAGAT TCTGCTGTTC
TCGGCCGTGC TTGGCGGCCT CGGCATGTGG ACGCTCTACA CGTTCGCCAA TCCGCTTACC
ATGTGGCTCA CGCTGGCTAC GTTCGTGGGC TATGCCGTCA TCTATACGCT GTTGCTCAAG
CCTGCCACGC CGCAGAACAT CGTGATCGGC GGCGCCTCGG GCGCCATGCC GCCGGCGCTC
GGCTGGGCCG CGGTCACCGG CCACGTGCCG GGCGACGCCT GGATCCTGGT GCTGATCATC
TTCGTGTGGA CGCCGCCGCA TTTCTGGGCG CTCGCGCTGT ATCGCCGCAA AGACTACGAA
AACGCCGGCC TGCCGATGCT GCCGAACACG CACGGCGAGA AGTACACGCG CCTGCATATC
CTGCTGTACA CGGTGATCCT GTTCGCGGTC ACCATGATGC CCTTCATCTC CGGCATGAGC
GGCGTGGTGT ATCTCGCGGC GGCCGTGCTG CTGGGTGCCG TGTTTCTTGC CTATGCGTGG
AAGATCTATC GCGAGTACTC GGACGATCTG GCGCGCAAGA CCTTCCGTTA TTCGATCGTC
TATCTCTCGC TGCTGTTCGC CGCGCTGCTG ATCGATCACT ATGCGCGCGT CGTGATCGGC
GCGTAA
 
Protein sequence
MDSTTLSQTP GSRVSQYIAL TKPRVTQLAV FCAVIGMFLS TPGMVPWTPL IGGTVGIWLL 
AGAAFAINCL VEQKIDAKMR RTSWRPSARG EITTAQILLF SAVLGGLGMW TLYTFANPLT
MWLTLATFVG YAVIYTLLLK PATPQNIVIG GASGAMPPAL GWAAVTGHVP GDAWILVLII
FVWTPPHFWA LALYRRKDYE NAGLPMLPNT HGEKYTRLHI LLYTVILFAV TMMPFISGMS
GVVYLAAAVL LGAVFLAYAW KIYREYSDDL ARKTFRYSIV YLSLLFAALL IDHYARVVIG
A