Gene Bphyt_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0547 
Symbol 
ID6281011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp599282 
End bp599920 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID642620111 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_001894196 
Protein GI187922554 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGC AACCGCCGGC TCAGGCCGAC CGCTCTTTCA ACCGTTCGAT GCTGATCAAG 
CTGTTCATCG TCGCGTTGAT GATGTTCGGT TTCGGTTTCG CGCTGATACC GATGTACCGC
GCGATCTGCG AGATCACCGG CATCAACAAC CTCGTGCAGC GTGACGCTAC GGCGCGCGAG
GCGAAGAATA CGCAGGTCGA CATGAGCCGC ACGATTTCGA TCGAATTCGA TGCGAACGCA
CGCGGCCCGC TGGGTTTCAA GCCGGAGCAA CGCAGTCTCG ACGTGCATCC GGGCGAAGTG
ACGACGGTGA TGTACGAGGT GAGCAACGAA CAGGCGCGCA CGATTCAGGC GCAAGCCATT
CCGAGCTACG CGCCGAAGCA GGCCACCGAG TACTTCAAGA AGATCGAGTG TTTTTGCTTT
ACGCAGCAAA CTTTGACGGC GAATCAGACG AAGCGGATGC CGGTGGTGTT CGTAGTCGAT
CCGAAGTTGC CGAAGGACGT GAAAACGATC ACGTTGTCGT ACACGTTCTT TGAGTTGAAT
ACGCCGGCAG CGGCGACGAC CGGAAGCGCA GCGCCCACGG CGAATACGGT AATGGGCGCG
GCTAAAAGTA TGGCGGCTGC GGCTGTCAAT CCCGCCTGA
 
Protein sequence
MSTQPPAQAD RSFNRSMLIK LFIVALMMFG FGFALIPMYR AICEITGINN LVQRDATARE 
AKNTQVDMSR TISIEFDANA RGPLGFKPEQ RSLDVHPGEV TTVMYEVSNE QARTIQAQAI
PSYAPKQATE YFKKIECFCF TQQTLTANQT KRMPVVFVVD PKLPKDVKTI TLSYTFFELN
TPAAATTGSA APTANTVMGA AKSMAAAAVN PA