Gene Bphyt_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0545 
Symbol 
ID6281581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp597377 
End bp598990 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content62% 
IMG OID642620109 
Productcytochrome c oxidase, subunit I 
Protein accessionYP_001894194 
Protein GI187922552 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02891] cytochrome c oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGCA TCGGACACGA TGTAGTCGCA GGCCACGAAC ACGTGCACGG CGACCATGCC 
CACGAAACGC CGCATGGCTG GCGCCGTTGG CTGTTCGCAA CCAATCACAA GGACATCGGT
ACGCTGTACC TGATCTTCTC GTTCACCATG TTCCTCTCCG GGGGCGTGAT GGCGCTGATG
ATCCGTGCCG AACTGTTCGA ACCGGGCCTG CAGATCATGC GTCCCGAGTT CTTCAACCAG
TTGACCACCA TGCACGGCCT GATCATGGTG TTCGGCGCGA TCATGCCGGC TTTCGTCGGC
TTCGCGAACT GGATGGTGCC GCTGCAGATC GGCGCATCGG ACATGGCTTT TGCCCGCATG
AACAACTTCA GCTTCTGGCT TCTGCCGGTG GCGGCTGTTC TGCTGGTCGG TTCGTTCTTC
TCGCCGGGCG GCGCGACCGC TGCGGGCTGG ACGCTCTACG CGCCGCTGTC CACGCAGATG
GGCCCGGGCA TGGACTTCGC AATTTTCGCG ATCCACTTGA TGGGCGCTTC GTCGATCATG
GGCGGGATCA ACATCGTCGT GACGATCCTG AACATGCGCG CACCCGGCCT CACACTCATG
AAGATGCCGA TGTTCGTCTG GACGTGGCTG ATCACCGCGT ACCTGCTGAT CGCCGTGATG
CCGGTTCTGG CAGGCGCGAT CACCATGGTG CTGTTCGACC GCCACTTCGG CACGTCGTTC
TTCAACGCGG CAGGCGGCGG CGACCCGGTC ATGTACCAGC ACATCTTCTG GTTCTTCGGG
CACCCCGAGG TGTACATCAT GATCTTGCCG GCGTTCGGGA TCGTGTCGCA GGTGATTCCG
GCGTTCTCGC GCAAGCCGCT GTTCGGCTAT AGCTCGATGG TCTACGCCAC CTCGTCGATC
GCGATTCTGT CGTTCATGGT CTGGGCGCAC CACATGTTCG CAACCGGCAT GCCGGTCACG
GGCCAGCTGT TCTTCATGTA TGCGACCATG CTGATCGCCG TGCCGACGGG CGTGAAAGTG
TTCAACTGGG TCGCGACAAT GTGGCGCGGT TCGCTGAGCT TCGAAACGCC GATGCTGTTT
GCTGTCGGCT TCCTGCTGGT GTTCACGTTC GGCGGCCTGT CGGGTCTGAT GCTGGCCATG
GCGCCGCTCG ACATCCAGTA CCACGGTACT TACTTCGTGG TGGCTCACTT CCACTACGTG
CTGGTGGCGG GTTCGCTGTT CGCGCTGTTC TCCGGCTGGT ACTACTGGGC GCCAAAGTGG
ACCGGCTGGA TGTACAACGA AACGCGCGGC AAGATCCACT TCTGGGCGTC GATGTTCTTC
TTCAACCTCG CGTTCCTGCC GATGCACTTC GTCGGTCTCG CAGGCATGCC GCGTCGTTAT
GCCGACTACC CGGCACAGTT CACGGACTGG AATCAGGTCA TCTCGATCGG CGCGTTCGGC
TTCGGTCTGG CGCAGGTGTA CTTCCTGTTC GCGGTTGCAT TGCCGGCCTA CCGTGGCGGC
GGCGAACTCG AAAAGGCTGG CGACAAGCCT TGGGACGGCG CAACGGGCCT CGAATGGACC
GTGCCGAGCC CGGCTCCGTT CCACACGTTC GAAAACCCGC CGACCGTCGA GTAA
 
Protein sequence
MSSIGHDVVA GHEHVHGDHA HETPHGWRRW LFATNHKDIG TLYLIFSFTM FLSGGVMALM 
IRAELFEPGL QIMRPEFFNQ LTTMHGLIMV FGAIMPAFVG FANWMVPLQI GASDMAFARM
NNFSFWLLPV AAVLLVGSFF SPGGATAAGW TLYAPLSTQM GPGMDFAIFA IHLMGASSIM
GGINIVVTIL NMRAPGLTLM KMPMFVWTWL ITAYLLIAVM PVLAGAITMV LFDRHFGTSF
FNAAGGGDPV MYQHIFWFFG HPEVYIMILP AFGIVSQVIP AFSRKPLFGY SSMVYATSSI
AILSFMVWAH HMFATGMPVT GQLFFMYATM LIAVPTGVKV FNWVATMWRG SLSFETPMLF
AVGFLLVFTF GGLSGLMLAM APLDIQYHGT YFVVAHFHYV LVAGSLFALF SGWYYWAPKW
TGWMYNETRG KIHFWASMFF FNLAFLPMHF VGLAGMPRRY ADYPAQFTDW NQVISIGAFG
FGLAQVYFLF AVALPAYRGG GELEKAGDKP WDGATGLEWT VPSPAPFHTF ENPPTVE