| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0537 |
|---|
| Symbol | |
|---|
| ID | 6281285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 590413 |
|---|
| End bp | 590883 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642620101 |
|---|
| Product | preprotein translocase subunit SecB |
|---|
| Protein accession | YP_001894186 |
|---|
| Protein GI | 187922544 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1952] Preprotein translocase subunit SecB |
|---|
| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACG AGAATAACCA GCCGTTCTTC AATATCCAGC GCATCTATCT GAAGGACATG
TCGCTCGAGC AGCCGAATTC GCCGGGCATC TTCCTCGAGC AGGAAATGCC CTCGGTCGAA
GTCGAAGTCG ACGTGAAGGC CGAGCGCCTC GCCGACACCG TGTTCGAAAT CCTCGTCACG
GGCACGGTCA CGGCCAAGGT GTCGGACAAG GTGGCGTTCC TGATCGAAGC CAAGCAAGCC
GGCATTTTCG ACATCCGCAA CATCCCGGCT GAGCAGATCG ACCCGCTGGT CGGCATTGCC
TGCCCGACCA TCCTGTTCCC GTACCTGCGC TCGAACATCG CCGACGCGAT CACCCGCGCC
GGTTTCCCGC CGATCCACCT CGCCGAGATC AACTTCCAGG CGCTGTACGA GCAACGTCTC
GCGCAGATGG GTGGCCAGGA CGGCGCGGCG CAGAACGGCG TCACGCACTA A
|
|---|
| Protein sequence | MSDENNQPFF NIQRIYLKDM SLEQPNSPGI FLEQEMPSVE VEVDVKAERL ADTVFEILVT
GTVTAKVSDK VAFLIEAKQA GIFDIRNIPA EQIDPLVGIA CPTILFPYLR SNIADAITRA
GFPPIHLAEI NFQALYEQRL AQMGGQDGAA QNGVTH
|
|---|
| |