Gene Bphyt_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0529 
Symbol 
ID6281488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp582866 
End bp583393 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content64% 
IMG OID642620093 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_001894178 
Protein GI187922536 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.467487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA TTCTGATCAT TGCGCACGCT CCGTTCGCCA CCGCGTTGCG CGATTGTATT 
TCGCACATCT ATGGTGGCTT GCCGGCTCGC ATCGGCGTGA TCGACGTATC GCCGGATTGC
GATCCCGCAC AGCAGGTTGC GTTTGCGCAC TCGGAAATCG AGCGTCTGAA GGAAGAAAAC
GGCGCGCTCG TCCTCACGGA TATGTTCGGC GCCACGCCGG CGAATATCGC CGGACGGCTC
GCTTCGTTGC CGGACGTGCG CGTGCTGTGC GGCGTCAACT TGCCGATGCT GGTGCGTGCG
GTCTGCTATC ACGCCACGCC GCTCGACACG CTGGTCGACA AGGCACTCGC TGGCGCCACC
AAAGGCGTGC ATGCAATCGG ACCGGCGACG CCGGCGCCCA TCGCGCCCAC GGCGGAATCC
GGCGACTGTT TGCCGGCTTT GCCGCCGGAG GCAGCATCGG CTGACTGTAT TCCGGCGTTA
CCGCCCGAGG CCGACCTGAC GCAAAAAGCT GACTCGGCCG GCTTATAA
 
Protein sequence
MAGILIIAHA PFATALRDCI SHIYGGLPAR IGVIDVSPDC DPAQQVAFAH SEIERLKEEN 
GALVLTDMFG ATPANIAGRL ASLPDVRVLC GVNLPMLVRA VCYHATPLDT LVDKALAGAT
KGVHAIGPAT PAPIAPTAES GDCLPALPPE AASADCIPAL PPEADLTQKA DSAGL