Gene Bphyt_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0520 
Symbol 
ID6281261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp572471 
End bp573823 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content65% 
IMG OID642620084 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_001894169 
Protein GI187922527 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.150741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACC ACGGCCTGCA GGTGCTGTAT ATCGAAGACG ACGAACTGGT GCGGCGCGCC 
AGCGTGCAGA GCCTGCAACT GGCGGGCTTC GACGTGATCG GCCATGCCTC GGTGGAATCC
GCGGCAAAGA CCATCAGCGC GGACTTCTCC GGCGTGATCG TCAGCGACAT TCGCTTGCCG
GGCGCGAGCG GCCTCGACCT GCTCGCTCAA TGCCACGAGC GTGCGCCCGA CGTGCCGGTG
ATTCTGGTCA CGGGACACGG CGATATTTCA ATGGCCGTCC AGGCGATGCG CGATGGCGCG
TACGACTTCA TCGAAAAGCC TTTCGCGTCC GAACGTTTGA TCGAAACCGT GCGGCGCGCG
TTGGAGCGCC GCAAGCTGGT GCTGGAGAAC CTCGCGCTGC GCCGTGAGTT GGCGGAACAG
AACTCGGTGG CGCCGCGGAT CATCGGCAGG AGTCCGGCCA TCGAACAGGT GCGTCGGCTG
ATCGCCAATG TCGCGCCCAC CGACGCCTCC GTGCTGATCA ACGGCGACAC TGGCGCGGGC
AAGGAGTTGA TCGCGCGCAG TTTGCATGAG TTGTCGCCGC GGCGTGACAA GCCGTTTATC
GCGGTGAACT GCGGCGCGCT GCCGGAGCCG ATGTTCGAGT CGGAAATGTT CGGCTACGAG
CCGGGTGCTT TTACGGGGGC CGCGAAACGC CGCGTCGGCA AGCTCGAACA TGCGTCGGGC
GGCACGCTGT TTCTGGATGA AATCGAGAGC ATGCCGCTCG CCTTGCAGGT CAAGCTACTG
CGTGTGCTGC AGGACGGCGT GCTGGAACGG CTCGGCTCGA ATCAGCCGAT TCGCGTGAAT
TGCCGCGTGG TCGCCGCTGC CAAGGGCGAT ATGGCCGAAC ACGTCGCGGA CGGTTCGTTC
CGGCGCGATC TGTTGTACCG GCTGAACGTG GTGACGATCG CACTGCCGCC GTTGGGTGAA
CGTCGCGAGG ACATCGTGCC GCTCTTCGAA CACTTCCTGC TGGACGCGGC GGTGCGCTAT
CAACGCCCCG CGCCGATCCT CACCGACCGT CAACGCGCCG GCCTGATGCA GCGCGACTGG
CCGGGCAACG TGCGCGAGCT GCGCAACGCC GCCGACCGCT TCGTGCTCGG CATTGCGGAC
GATCCGGTGA TGTCTTTCGG CGACGACGGC GCGGCCACGC AGCCGTTGAA GGAGCGAGTC
GAACAATTCG AGCGGGCGGT GATCGCGGAA GCGTTGGAGC AGACCGGAGG CGTTGTGGCG
GTCGCGGCGG ACAAGCTGCA ACTCGGTAAG GCGACGCTTT ACGAGAAGAT CAAGCGCTAC
GGGCTTGCCG CGAAGGGAGA AGGGGAGCGG TGA
 
Protein sequence
MLNHGLQVLY IEDDELVRRA SVQSLQLAGF DVIGHASVES AAKTISADFS GVIVSDIRLP 
GASGLDLLAQ CHERAPDVPV ILVTGHGDIS MAVQAMRDGA YDFIEKPFAS ERLIETVRRA
LERRKLVLEN LALRRELAEQ NSVAPRIIGR SPAIEQVRRL IANVAPTDAS VLINGDTGAG
KELIARSLHE LSPRRDKPFI AVNCGALPEP MFESEMFGYE PGAFTGAAKR RVGKLEHASG
GTLFLDEIES MPLALQVKLL RVLQDGVLER LGSNQPIRVN CRVVAAAKGD MAEHVADGSF
RRDLLYRLNV VTIALPPLGE RREDIVPLFE HFLLDAAVRY QRPAPILTDR QRAGLMQRDW
PGNVRELRNA ADRFVLGIAD DPVMSFGDDG AATQPLKERV EQFERAVIAE ALEQTGGVVA
VAADKLQLGK ATLYEKIKRY GLAAKGEGER