Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0520 |
Symbol | |
ID | 6281261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 572471 |
End bp | 573823 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642620084 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_001894169 |
Protein GI | 187922527 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.150741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACC ACGGCCTGCA GGTGCTGTAT ATCGAAGACG ACGAACTGGT GCGGCGCGCC AGCGTGCAGA GCCTGCAACT GGCGGGCTTC GACGTGATCG GCCATGCCTC GGTGGAATCC GCGGCAAAGA CCATCAGCGC GGACTTCTCC GGCGTGATCG TCAGCGACAT TCGCTTGCCG GGCGCGAGCG GCCTCGACCT GCTCGCTCAA TGCCACGAGC GTGCGCCCGA CGTGCCGGTG ATTCTGGTCA CGGGACACGG CGATATTTCA ATGGCCGTCC AGGCGATGCG CGATGGCGCG TACGACTTCA TCGAAAAGCC TTTCGCGTCC GAACGTTTGA TCGAAACCGT GCGGCGCGCG TTGGAGCGCC GCAAGCTGGT GCTGGAGAAC CTCGCGCTGC GCCGTGAGTT GGCGGAACAG AACTCGGTGG CGCCGCGGAT CATCGGCAGG AGTCCGGCCA TCGAACAGGT GCGTCGGCTG ATCGCCAATG TCGCGCCCAC CGACGCCTCC GTGCTGATCA ACGGCGACAC TGGCGCGGGC AAGGAGTTGA TCGCGCGCAG TTTGCATGAG TTGTCGCCGC GGCGTGACAA GCCGTTTATC GCGGTGAACT GCGGCGCGCT GCCGGAGCCG ATGTTCGAGT CGGAAATGTT CGGCTACGAG CCGGGTGCTT TTACGGGGGC CGCGAAACGC CGCGTCGGCA AGCTCGAACA TGCGTCGGGC GGCACGCTGT TTCTGGATGA AATCGAGAGC ATGCCGCTCG CCTTGCAGGT CAAGCTACTG CGTGTGCTGC AGGACGGCGT GCTGGAACGG CTCGGCTCGA ATCAGCCGAT TCGCGTGAAT TGCCGCGTGG TCGCCGCTGC CAAGGGCGAT ATGGCCGAAC ACGTCGCGGA CGGTTCGTTC CGGCGCGATC TGTTGTACCG GCTGAACGTG GTGACGATCG CACTGCCGCC GTTGGGTGAA CGTCGCGAGG ACATCGTGCC GCTCTTCGAA CACTTCCTGC TGGACGCGGC GGTGCGCTAT CAACGCCCCG CGCCGATCCT CACCGACCGT CAACGCGCCG GCCTGATGCA GCGCGACTGG CCGGGCAACG TGCGCGAGCT GCGCAACGCC GCCGACCGCT TCGTGCTCGG CATTGCGGAC GATCCGGTGA TGTCTTTCGG CGACGACGGC GCGGCCACGC AGCCGTTGAA GGAGCGAGTC GAACAATTCG AGCGGGCGGT GATCGCGGAA GCGTTGGAGC AGACCGGAGG CGTTGTGGCG GTCGCGGCGG ACAAGCTGCA ACTCGGTAAG GCGACGCTTT ACGAGAAGAT CAAGCGCTAC GGGCTTGCCG CGAAGGGAGA AGGGGAGCGG TGA
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Protein sequence | MLNHGLQVLY IEDDELVRRA SVQSLQLAGF DVIGHASVES AAKTISADFS GVIVSDIRLP GASGLDLLAQ CHERAPDVPV ILVTGHGDIS MAVQAMRDGA YDFIEKPFAS ERLIETVRRA LERRKLVLEN LALRRELAEQ NSVAPRIIGR SPAIEQVRRL IANVAPTDAS VLINGDTGAG KELIARSLHE LSPRRDKPFI AVNCGALPEP MFESEMFGYE PGAFTGAAKR RVGKLEHASG GTLFLDEIES MPLALQVKLL RVLQDGVLER LGSNQPIRVN CRVVAAAKGD MAEHVADGSF RRDLLYRLNV VTIALPPLGE RREDIVPLFE HFLLDAAVRY QRPAPILTDR QRAGLMQRDW PGNVRELRNA ADRFVLGIAD DPVMSFGDDG AATQPLKERV EQFERAVIAE ALEQTGGVVA VAADKLQLGK ATLYEKIKRY GLAAKGEGER
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