Gene Bphyt_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0497 
Symbol 
ID6281538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp549173 
End bp549817 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID642620061 
Producthypothetical protein 
Protein accessionYP_001894146 
Protein GI187922504 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0124611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAC ACACCAAAAA ATATCTGATT GACGGCCCGG TCGGCAAGAT CGAGGTTGCG 
CTGGATCTGC CCGACGACAC GCGCGAAAAC GGCGCCGCGC CGCGCGGCAT CGCGCTGGTC
GCGCATCCGC ATCCGCTGTT CGGCGGCACG ATGGACAACA AGGTCGCGCA GACGCTCGCA
CGCACACTCG TGCAGTTGAA CTACGTGACG TATCGCTCGA ATTTTCGCGG CGTCGGCGAA
ACGCAAGGCG AACATGACGC AGGCATCGGC GAGCGCGACG ACTTGCGCGC CGTGCTCGAT
CACATGCGCG CCGAACCGGG CCAAGGCGAT CTGCCCCTCG TGCTGGCGGG TTTTTCGTTC
GGGACCTTCG TGTTGTCGCA CGTGGCCGCG CAGTTGCGCG AAGAAGGTCA GGAGATCGAG
CGAATGGTGC TGGTCGGCAC GGCGGCGAGC CGCTGGGAAG TCGCCCCGGT GCCGGAAAAC
ACGCTGGTGA TTCACGGCGA AACCGATGAG ACGGTTCCCA TTCAATCCGT TTACGACTGG
GCGCGGCCGC AGGAATTGCC GGTTGTCGTG ATTCCGGGCG CGGAGCATTT TCTGCATCGC
AAGCTGCACG TGCTGAAGCG GATCATCGTC GACGCATGGC GGTAA
 
Protein sequence
MNVHTKKYLI DGPVGKIEVA LDLPDDTREN GAAPRGIALV AHPHPLFGGT MDNKVAQTLA 
RTLVQLNYVT YRSNFRGVGE TQGEHDAGIG ERDDLRAVLD HMRAEPGQGD LPLVLAGFSF
GTFVLSHVAA QLREEGQEIE RMVLVGTAAS RWEVAPVPEN TLVIHGETDE TVPIQSVYDW
ARPQELPVVV IPGAEHFLHR KLHVLKRIIV DAWR