Gene Bphyt_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0494 
Symbol 
ID6281535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp546889 
End bp547515 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID642620058 
Producthypothetical protein 
Protein accessionYP_001894143 
Protein GI187922501 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.345073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.081408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCT CGATTCACCG ATTTTTGCCC ACGAGCGCCG CGCTGGCGGT GCTGCTCGCA 
TTCGGCGTGC TCGCCGCGGG CTGCGCCGGC ACACCGGCAG CGCTCTCTGA CATCCGCTAC
GACTTCGGGC CGCCGAGTCC GGCAGCGTCC GCCGGCACGT CGCCGGCCGT GAAGGTGCTC
GATGTGAGCG CGCCCGATGT GCTCGAGTCG GACAAGCTGA TGTACCGCCT GAGTTACGCC
GACGCGCAGC AGACCGCCGC GTACGCGAAC AGCCACTGGA CCATGACGCC TTCGCAATTG
CTGACCCAGC GTCTGCGTGG CGCGCTCAGT TCGCGCGGCA CGGTGCTGAC GGGCGCCGAC
GGCGTCGCCG CGCCGGTGCT GAAGGTCGAT CTGAGCGAGT TCGAACAGGT CTTCGACAGC
CAGTCCGAAA GTCACGCCGC GGTCACCGCG CGCGCCACGC TCACGCAAAG CGGCAAGGTG
CTCAGCCAGC GCACGTTCAT CGCGCGGGCG CCGTCCAGGT CGGCGGACGC CGCCGGCGGC
GCGCAGGCGC TCGCCACCGC CAGCGACGAT CTCGTCTCGC AGATTGGCGC ATGGCTCGGC
GTGCAGGCGC TGGTCGCCGC GCAATGA
 
Protein sequence
MSRSIHRFLP TSAALAVLLA FGVLAAGCAG TPAALSDIRY DFGPPSPAAS AGTSPAVKVL 
DVSAPDVLES DKLMYRLSYA DAQQTAAYAN SHWTMTPSQL LTQRLRGALS SRGTVLTGAD
GVAAPVLKVD LSEFEQVFDS QSESHAAVTA RATLTQSGKV LSQRTFIARA PSRSADAAGG
AQALATASDD LVSQIGAWLG VQALVAAQ