Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0483 |
Symbol | |
ID | 6283711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 536508 |
End bp | 537743 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620047 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_001894132 |
Protein GI | 187922490 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0914571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGAA TCGAATTCCT TGAACCCGAA ACCCAGCGCG CTCGCGCGTC CAACCACTCG CGCCCGACGC CATCGCGCGG TCGCCTCACG CGTCGTGCCG TTGCGCTATG CGCGGCGTTG GCGGGTGTAT TGCCCGGTAT CGCGTTGGCG CAGGTGAAAA TCGGCCTGGT ATTGTCGCTC ACCGGACCGG CCGCGTCGCT CGGCATTCCG GCGCGCGATA CGGTCGCGCT GCTGCCCAAA CAGATCGGCG GTCAGAGCGT CGAATACATC GTGCTCGACG ACGCATCCGA TACTACGCAG GCCGTGCAGG ACACCAAGAA ACTGATCTCC GAGAATCACG TCGACGCGAT CATCGGGTCG TCGATCACGC CGAATTCGCT GGCCATGATC GATGTAGTCG CCGAAGGTCA AACGCCGATG ATCTCGCTGG CCTCGTCGGC GAAAATCATC GAGCCCGTGG ATGCGAAACG CCACTGGGTC TTCAAGACGC CACAAACCGA CGCGATGATG GCGTCGGCGA TTGCCGAACA CGCCAGTCTG CACGGCGTCA AAACCATCGC ATTTATTGGC CAGGCCGACG CGCTCGGCGA GACCTTCTAC ACCGAGGTCG CGAAGTTCGC GCAGCTGCAT CACATCGAGA TGGTGGCGAG CGAGCGCTTT AATCGCACCG ATCCGAGCGT GACCGGCCAG GTCCTTAAGA TTCTCGCGAC GCATCCGGAC GCGGTGGTGG TCGGCGCGGC CGGCACGCCC GCCGCCTTGC CGCCGAAAAC ACTGAGGGAA CGTGGCTACA AAGGCCTGAT CTATCACAAT CACGGCGTTG GGAATAACGA CTTCCTGCGC GTCTGCGGCG CCGATTGCAA TGGCACCTTC CTGCCCGCGA GTCCGGTGCT GGTCGCCGCG CAATTGCCGG CGGATCATCC GGCCAAGCGG CTTGCGCTCG ATTACATCGC GCGCTTCGAA GCGGTGCGCG GCGCGGGCAG CGTCTCGGCA TTCGGCTCGT ACACGTGGGA CGCGGGCATG CTGCTCGGTC ATGCCGTACC GATCGCGTTG AAAAGCGGCG CGCCGGGCAC GCCGGAATTT CGCCGCGCGC TGCGCGATGC GCTCGAAGCA ACACGCGGTC TCGCGGACAC CAACGGCGTC GTCAACATGA GCGCCACGGA TCACCTCGGG CTCGATCAGC GGGCGCGGGT GATGGTCGAA ATCAAGAACG CGAAGTGGGT TTATCAGCCG CGTTGA
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Protein sequence | MPRIEFLEPE TQRARASNHS RPTPSRGRLT RRAVALCAAL AGVLPGIALA QVKIGLVLSL TGPAASLGIP ARDTVALLPK QIGGQSVEYI VLDDASDTTQ AVQDTKKLIS ENHVDAIIGS SITPNSLAMI DVVAEGQTPM ISLASSAKII EPVDAKRHWV FKTPQTDAMM ASAIAEHASL HGVKTIAFIG QADALGETFY TEVAKFAQLH HIEMVASERF NRTDPSVTGQ VLKILATHPD AVVVGAAGTP AALPPKTLRE RGYKGLIYHN HGVGNNDFLR VCGADCNGTF LPASPVLVAA QLPADHPAKR LALDYIARFE AVRGAGSVSA FGSYTWDAGM LLGHAVPIAL KSGAPGTPEF RRALRDALEA TRGLADTNGV VNMSATDHLG LDQRARVMVE IKNAKWVYQP R
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