Gene Bphyt_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0480 
Symbol 
ID6281119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp532651 
End bp533958 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content66% 
IMG OID642620044 
Producthypothetical protein 
Protein accessionYP_001894129 
Protein GI187922487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0589593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCAG CCCCCGCTAC CCGCCGTTCC GATCACACGC CGCCCAGCGG GCCGCGCACC 
GGTTTGCGCG TGTGGCGTTG GATCGTGGTG CTGTTCATCG TGGCCGTTTT GCACTGGATC
GCCGCGCAAT GGGTCGAACG CAACCGCGCG AACCTCAATC CCTCCGACAA TGAGCATGTG
CCGGTACAAG TCGCATTGCT GACGCCCGAA CGTATCGAAC GCAAACCGGC CGCCACCGCT
TCGCCCGCGC CTGAACCCGC TCCCGCTCGC CACGCTGCAG CGAGCAAGCC GCGCAAACAC
GTGCTGACTG CCCTGCAGCC GGCAAAGCAA GCCGCGCCGG CGGTACCTGT TACGGCATCG
GATGTCGTCG CCAGCGCTCC GGGCGCGGCG TCGAGCGCCA ACGCAGCGCC CAATGCCGCT
GCGAGCGCCA CCGGCACGGC CAGCACGCCC GCCGCCGCGA GCGCGCCGCA AGCGTCGCCG
GGCGTGAAGT TCTCCGTGCC GCCATCGGGC GAACTGCAGT ACGACACGTT CTACAACGGC
GTGCGCAACC AGCCCGGCAC GATCCACTGG ACCAGCAACG CGCAAAGCTA CGAAATGGTC
GTCTCCGTGC CGCTGCCGTT TGTCGGCACC TTCGTGTATT CGAGCCATGG CCGTATCGAC
GCCTTCGGTC TCGCGCCGGA CCAGTACATC GAAAAACGCG GCCGCCGGGC GGAAGACATC
GCAATTTTTA ACCGCACCGA CAAGAAGATC GCTTTCACAC GCACCCCGTC CACCTTACCG
TTGCCCGACG GCGCGCAGGA CCGTTTCAGC ATGGTGATGC AGCTTGCGAG CCTCGTACGT
GGCGATCCGG GTGCCTATAA GCCCGGCGTG ACGCGCCAGT TCTTCGTGGT CGATAACGAT
AGCGGCGAAA ACTGGCCGGT CGAGACGATC GGCGATGAAA CCATTCGCAC GGCGCAAGGT
TTCCTCGACA CGCGTCATTT CAAACGCCTG CCCCGGCATG ACGGCGATTT GCGGCGCATC
GACGTGTGGC TCGCGCCGTC GCTCGGCTGG CTGCCTGCGC GCATCGTGCA GACGGAACCG
AACGGCACGC AATTCGAGCT GGTGTGGCGC GGCAAGCTCA ATGCGGACAC GGGTGGCAGC
GCTCCCAACG GCAATGGCGA CGGGGCAGCG GCTTCTCCCG ACAATGCAAC CGGTCCATCG
GCTCCGCCTG CATCGGCGGC TATGCCCGAG GTCGCGCCCT CCGTGCCGGT CGATCCGGCC
GACCCCGGCG ATACGGCCAG CAATACGCCC GGCATCATCA AGCCCTGA
 
Protein sequence
MSSAPATRRS DHTPPSGPRT GLRVWRWIVV LFIVAVLHWI AAQWVERNRA NLNPSDNEHV 
PVQVALLTPE RIERKPAATA SPAPEPAPAR HAAASKPRKH VLTALQPAKQ AAPAVPVTAS
DVVASAPGAA SSANAAPNAA ASATGTASTP AAASAPQASP GVKFSVPPSG ELQYDTFYNG
VRNQPGTIHW TSNAQSYEMV VSVPLPFVGT FVYSSHGRID AFGLAPDQYI EKRGRRAEDI
AIFNRTDKKI AFTRTPSTLP LPDGAQDRFS MVMQLASLVR GDPGAYKPGV TRQFFVVDND
SGENWPVETI GDETIRTAQG FLDTRHFKRL PRHDGDLRRI DVWLAPSLGW LPARIVQTEP
NGTQFELVWR GKLNADTGGS APNGNGDGAA ASPDNATGPS APPASAAMPE VAPSVPVDPA
DPGDTASNTP GIIKP