Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0468 |
Symbol | |
ID | 6281576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 518904 |
End bp | 520490 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642620032 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_001894117 |
Protein GI | 187922475 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCA AACTGCTCGC AGCCGCCGTA CTGTTCACGG CGCCCGCGCT CGTGCTCGCC AAACCGCTGA CCGTCTGTAC CGAGTCGAGC CCTGACGGCT TCGATGTCGT GCAGTTCAAT TCGCTCGTCA CGACCAACGC GTCGGCCGAC GTGATCTTCA ACTCGCTGGT CTCGTACGAC GAGGCCGAGA AGAAAGTGGT GCCCGCGCTG GCCGACAAGT GGGACGTGAG CGCCGACGGC CTCACCTACA CGTTCCATCT GCGCCCGAAC GTGCAGTTCC AGACCACCGA CTACTTCAAG CCCACTCGCG CGCTGAATGC CGACGACGTC GTCTTCACGT TCGACCGCAT GCTCAACGAC AGCAATCCGT GGCACAAGGT AGCGGGCGCG AGCGGCTTCC CGCATGCGCA GTCGATGGGT TTGCCGAAGC TCATCAAGTC GATCAGCAAG GTCGACGACA ACACCGTCAA GTTCGAACTG AACGCGCCCG ACGCGACCTT CGTGTCGATC CTGACCATGG GTTTCGCCTC GATCTATTCG GCCGAATACG CCGACCAGTT GCTCAAGGCC GGCAAGCAGG TCGATCTGAA CTCGAAGCCG ATCGGCACCG GTCCGTTCGA GCTGAAGAGC TATACAAAAG ACGCGGTGAT TCGGTACGAC GTGAATCCGA CCTACTGGGG CCCGAAACCG AAGATCGACC GCCTGATCTA CGCGATCACG CCGGACGCCA CGGTGCGGGC GCAGAAAGTG AAGGCCGGCG AATGCCAGAT CGCTTTGTCG CCGAAGCCGC AGGATCTCGC TGAAGCGAAG GGCGACAAAT CGCTCGCCAT CGTACAGACG CCCGCGTTCA TGACAGCGTT CGTCGCGTTG AACACGCAGA AGAAACCGCT CGACAACCAG AAGGTGCGGG CCGCGCTGAA CATGGCGTTC GACCGCACCA CCTATCTGAA GACCGTGTTC GACAACACGG CGACGCCGGC CGTGAATCCG TATCCGCCGA ACACGTGGAG CTACGACAAA GCCGTGAAGG CATGGCCGTA CGATCCGGCG AAGGCGAAGA AACTGCTCGC CGACGCGGGC TATCCGAACG GTTTCGAAAC GACGATCTGG GTGCGGCCGA ACGGCAGCGT GCTGAATCCG AATCCGAAGG CCGGCGCCGA ACTGCTGCAG GCCGACTTCG CGAAGATCGG CGTGAAGGCC GATGTGAAGG TGATCGAATG GGGCGAGTTG ATCAAGCAGG CCAAGCAAGG CCAGCATGAT TCGCTCTTCA TGGGCTGGGC CGGCGACAAC GGCGATCCGG ACAACTATCT GTCGCCGCTA TTCAGTTGCA ATGCGGTGAA GTCGGGGATC AACTTCGCGC GGTTCTGCGA TCAGGATCTG GACAAGCTGA TCGCAGACGG CAAGGCAACG CCGGATCAGG CCAAGCGCGC GAAGGCGTAT GAGCAGGCCC AGCAGATCAT TCACGATCAG GCGCTATGGA TTCCGCTCGG GTATCCGACC GCGGCGGCCA TCACTCGCAC GAATGTGAGC GGTTATCACG TGAGTCCATT TGGGCGGCAG AACTTCGGGG CTGTGTCTGT GCAGTGA
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Protein sequence | MRFKLLAAAV LFTAPALVLA KPLTVCTESS PDGFDVVQFN SLVTTNASAD VIFNSLVSYD EAEKKVVPAL ADKWDVSADG LTYTFHLRPN VQFQTTDYFK PTRALNADDV VFTFDRMLND SNPWHKVAGA SGFPHAQSMG LPKLIKSISK VDDNTVKFEL NAPDATFVSI LTMGFASIYS AEYADQLLKA GKQVDLNSKP IGTGPFELKS YTKDAVIRYD VNPTYWGPKP KIDRLIYAIT PDATVRAQKV KAGECQIALS PKPQDLAEAK GDKSLAIVQT PAFMTAFVAL NTQKKPLDNQ KVRAALNMAF DRTTYLKTVF DNTATPAVNP YPPNTWSYDK AVKAWPYDPA KAKKLLADAG YPNGFETTIW VRPNGSVLNP NPKAGAELLQ ADFAKIGVKA DVKVIEWGEL IKQAKQGQHD SLFMGWAGDN GDPDNYLSPL FSCNAVKSGI NFARFCDQDL DKLIADGKAT PDQAKRAKAY EQAQQIIHDQ ALWIPLGYPT AAAITRTNVS GYHVSPFGRQ NFGAVSVQ
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