Gene Bphyt_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0468 
Symbol 
ID6281576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp518904 
End bp520490 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content61% 
IMG OID642620032 
Productextracellular solute-binding protein family 5 
Protein accessionYP_001894117 
Protein GI187922475 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCA AACTGCTCGC AGCCGCCGTA CTGTTCACGG CGCCCGCGCT CGTGCTCGCC 
AAACCGCTGA CCGTCTGTAC CGAGTCGAGC CCTGACGGCT TCGATGTCGT GCAGTTCAAT
TCGCTCGTCA CGACCAACGC GTCGGCCGAC GTGATCTTCA ACTCGCTGGT CTCGTACGAC
GAGGCCGAGA AGAAAGTGGT GCCCGCGCTG GCCGACAAGT GGGACGTGAG CGCCGACGGC
CTCACCTACA CGTTCCATCT GCGCCCGAAC GTGCAGTTCC AGACCACCGA CTACTTCAAG
CCCACTCGCG CGCTGAATGC CGACGACGTC GTCTTCACGT TCGACCGCAT GCTCAACGAC
AGCAATCCGT GGCACAAGGT AGCGGGCGCG AGCGGCTTCC CGCATGCGCA GTCGATGGGT
TTGCCGAAGC TCATCAAGTC GATCAGCAAG GTCGACGACA ACACCGTCAA GTTCGAACTG
AACGCGCCCG ACGCGACCTT CGTGTCGATC CTGACCATGG GTTTCGCCTC GATCTATTCG
GCCGAATACG CCGACCAGTT GCTCAAGGCC GGCAAGCAGG TCGATCTGAA CTCGAAGCCG
ATCGGCACCG GTCCGTTCGA GCTGAAGAGC TATACAAAAG ACGCGGTGAT TCGGTACGAC
GTGAATCCGA CCTACTGGGG CCCGAAACCG AAGATCGACC GCCTGATCTA CGCGATCACG
CCGGACGCCA CGGTGCGGGC GCAGAAAGTG AAGGCCGGCG AATGCCAGAT CGCTTTGTCG
CCGAAGCCGC AGGATCTCGC TGAAGCGAAG GGCGACAAAT CGCTCGCCAT CGTACAGACG
CCCGCGTTCA TGACAGCGTT CGTCGCGTTG AACACGCAGA AGAAACCGCT CGACAACCAG
AAGGTGCGGG CCGCGCTGAA CATGGCGTTC GACCGCACCA CCTATCTGAA GACCGTGTTC
GACAACACGG CGACGCCGGC CGTGAATCCG TATCCGCCGA ACACGTGGAG CTACGACAAA
GCCGTGAAGG CATGGCCGTA CGATCCGGCG AAGGCGAAGA AACTGCTCGC CGACGCGGGC
TATCCGAACG GTTTCGAAAC GACGATCTGG GTGCGGCCGA ACGGCAGCGT GCTGAATCCG
AATCCGAAGG CCGGCGCCGA ACTGCTGCAG GCCGACTTCG CGAAGATCGG CGTGAAGGCC
GATGTGAAGG TGATCGAATG GGGCGAGTTG ATCAAGCAGG CCAAGCAAGG CCAGCATGAT
TCGCTCTTCA TGGGCTGGGC CGGCGACAAC GGCGATCCGG ACAACTATCT GTCGCCGCTA
TTCAGTTGCA ATGCGGTGAA GTCGGGGATC AACTTCGCGC GGTTCTGCGA TCAGGATCTG
GACAAGCTGA TCGCAGACGG CAAGGCAACG CCGGATCAGG CCAAGCGCGC GAAGGCGTAT
GAGCAGGCCC AGCAGATCAT TCACGATCAG GCGCTATGGA TTCCGCTCGG GTATCCGACC
GCGGCGGCCA TCACTCGCAC GAATGTGAGC GGTTATCACG TGAGTCCATT TGGGCGGCAG
AACTTCGGGG CTGTGTCTGT GCAGTGA
 
Protein sequence
MRFKLLAAAV LFTAPALVLA KPLTVCTESS PDGFDVVQFN SLVTTNASAD VIFNSLVSYD 
EAEKKVVPAL ADKWDVSADG LTYTFHLRPN VQFQTTDYFK PTRALNADDV VFTFDRMLND
SNPWHKVAGA SGFPHAQSMG LPKLIKSISK VDDNTVKFEL NAPDATFVSI LTMGFASIYS
AEYADQLLKA GKQVDLNSKP IGTGPFELKS YTKDAVIRYD VNPTYWGPKP KIDRLIYAIT
PDATVRAQKV KAGECQIALS PKPQDLAEAK GDKSLAIVQT PAFMTAFVAL NTQKKPLDNQ
KVRAALNMAF DRTTYLKTVF DNTATPAVNP YPPNTWSYDK AVKAWPYDPA KAKKLLADAG
YPNGFETTIW VRPNGSVLNP NPKAGAELLQ ADFAKIGVKA DVKVIEWGEL IKQAKQGQHD
SLFMGWAGDN GDPDNYLSPL FSCNAVKSGI NFARFCDQDL DKLIADGKAT PDQAKRAKAY
EQAQQIIHDQ ALWIPLGYPT AAAITRTNVS GYHVSPFGRQ NFGAVSVQ