Gene Bphyt_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0465 
Symbol 
ID6281573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp516674 
End bp517747 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content63% 
IMG OID642620029 
Productbeta-lactamase domain protein 
Protein accessionYP_001894114 
Protein GI187922472 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAC TCGAACATCA ACTCGACTAC CCGTTCGGCG ACACCTTGCC GGAAGCGGGC 
CGTGCGATGG AAGTCGCGCC AGGCGTGTTC TGGCTGCGCA TGCCGCTGCC TTTCGCGCTG
GATCACATCA ACCTCTGGCT GCTGCGCGAC GAGATCGACG GACAGCAGGG TTGGACGGTG
GTCGACTGCG GCATTACCTC GGACACGATC AAGGAGAACT GGGAGAAAGT GTTCGACTCG
GTGCTCGACG GTCTGCCGGT GCTGCGCGTG ATCGTCACGC ATTGCCATCC CGATCACATC
GGCCTCGCGC ACTGGATTTG CGCCGGCGGC GACAAAAAGC GCTGGGACGT GCGGCTATGG
ATGACGCTCG GCGAATACAT GCAGGCCCGC GTCATGGCTG CCGGCGACGG TTCGAATGCG
GGCGGCGAGG GCGCGGCGCG GCACTTCGCG CGGCACGGCG TGACCGACGA AGAGTCGCTC
GAGAAACTGC GCAATCGCAA GAGCTATTAC GCGAGCCTCG TGCCGGCGAT TCCGGGGCAG
TATCGTCGCT TGCGAGAAGC CGACGAAGTG AAGATCGGCG GCAAGACGTG GCGCGTGGTG
ACCGGCTTCG GCCATTCGCC GGAACACTGT GCGTTGTTCT GCGAAGAGAC CGGCGTGCTG
ATTTCCGGCG ACATGGTGCT GCCGCGTATC TCGACCAACG TGTCGGTGTT CGATATGGAG
CCTGAAGGCA CACCGCTCGC GTTATATCTG GAGTCGCTCG GCCGTTACGA GACGATGCCG
GAAGACACGC TCGTACTCCC TTCGCATGGC AAGCCGTTTC GCGGCGTGCG TACGCGGGTC
CGGCAATTGC GCGAGCATCA CGACGCGCGT CTAGCCGAAG TGCGCGAGGC GTGCGCGGAG
AAACCGCAGA GCGCCGCGGA TATCGTGCCG CTGATGTTCA AGCGGCAACT CGATATCCAT
CAGATGACGT TTGCGATGGG TGAAGCGCTG GCGCATTTGC ATCTGCTGTG GCTTGCGGGT
GAGTTGAAGC GCAAGCAGGA TGCGGATGGG GTGATTCGGT TTTCGGCGGT GTGA
 
Protein sequence
MNALEHQLDY PFGDTLPEAG RAMEVAPGVF WLRMPLPFAL DHINLWLLRD EIDGQQGWTV 
VDCGITSDTI KENWEKVFDS VLDGLPVLRV IVTHCHPDHI GLAHWICAGG DKKRWDVRLW
MTLGEYMQAR VMAAGDGSNA GGEGAARHFA RHGVTDEESL EKLRNRKSYY ASLVPAIPGQ
YRRLREADEV KIGGKTWRVV TGFGHSPEHC ALFCEETGVL ISGDMVLPRI STNVSVFDME
PEGTPLALYL ESLGRYETMP EDTLVLPSHG KPFRGVRTRV RQLREHHDAR LAEVREACAE
KPQSAADIVP LMFKRQLDIH QMTFAMGEAL AHLHLLWLAG ELKRKQDADG VIRFSAV