Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0454 |
Symbol | |
ID | 6281354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 504722 |
End bp | 506923 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642620018 |
Product | hypothetical protein |
Protein accession | YP_001894103 |
Protein GI | 187922461 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0142365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.307672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATCC AATGGCCGGA AGAAATGGCG GATGGAGGGC GACTGCAGCC GTCCGAAAGC GATGATGCAT TTCGCGATGG CGCGCTGCGA ATGCACGACG AAACACGCTC ATGCGAGCAG ACACTCCATA TCAGCTTGTT TTTCGACGGC ACGAATAACA ACGACGACAA GAAAAATCCG CGGCGCGATT CTCTCAAATA TTGCCATACC AACGTCGCCA GATTATTTAA AGCGGCAATC GAAAAGAATA GCGATGGTCT GTTCCCATTC TACATTCCCG GCGTAGGTAC TCCGCTACCA GACATCGGCG AAAAGACTTA TTTGCAGATG GGCAAGGCCA TGGCCAAGGG CTTCAACGCG CGTTGTCTTT GGGGCTTTAC CCGCGTTCTG AACGCAGTCT ATGAGACTGT CGCACCGGAC CGAACCCATC TTCTAGTCCC GGTAGACAAG GCCAAGCCCC TGTGCACCGC AGGCGCGGAC GGCGACATGA GCGGCTTCAA CGACCTCATC CAGATACTCG GCGTAACACA CAAGGATGCA GTAGATAACG GCGACAAACC ACGCACCATC AAAAAAGTCT GGATCAACGT GATCGGCTTT TCGCGTGGTG CAGCGGGTGC GCGTGCGTTC GTTCACAAAC TGGTCAACGA ATGGGCGCCC GGTGGCAATC TGGTGAAGTT CAGCGGCAAG TATGCAATAC CTTATCAGGT CAACTTCATG GGGCTTTTCG ACACGGTCGC CTCCGTGGGG CCGCCTGAGT TGACCCGTGC ATCGGTGGAT ATCGGATCAT TCGACGGCCA CTTCGCTTTC GCCAATAACG GCGCGATGCG CATTCCCAAT TCCGTCCGCT ATTGCGTCCA CGCGTTTTCG ATTCACGAAC AGCGCATGAG CTTTCCCGTC GATTCGATAC GCGATGTGGG CGGTTATCCC GGCGGAGTGC GTCTTGAAAT TGCCTATCCA GGCGTGCATT CGGATGTCGG CGGCGGATAC GCGCCGAACG AGCAGGGCAA GGGGCGTGGG TCCGGTCGCG GTAATCATGA CAGCGGCAAA CTAAGCCAGA TCCCGCTGCA CGACATGTAT ATTCACGCGC TCAAATATGG TGTCCCGCTG CAGAGCGGTT GCGATATCCT GGCTCAATCC GACACTGCAT CCGACTTCTC CCTCTCCCCC CAAACCATCA CCGCCTTCAA CGACTGGCGC AAAACAGCCG GTCCGATCGG TAGCATCGAA GATGCGATAA AGCACGGCAT GACGGAAATG CTGGCGTGGC GAACGCTACG CGCCAAGGTC GGCACGGCCG ACTACGTGAC CGAGCAGGAA TTCTTCCGTC TCGCGCAAGA GGACAGCATG ACACCGCATA AGGTGGCCCT CGACGTAGAC AGAGCCAGAA AAACAGACCC GGAATACCAG GCGCTCGCCA ACCGGCTGTC GAAATTGCTG GCAGAGAAAT CCCGCCTGGC GGACAACCGC ACCTATCCGA CCAACACGCC GCGCATCGCC CAGCTCGACG GCCAGATCAG CGCGACGCGC GAGTCGATGG ACCGGCGCAC GGAAGCGATC TGCGGCTCGG TCGGACATCC GGAAAAGAAA GATCCGTCTC CCGCGCGTCC CGGCGAAGGG CCGTGCGATG TCACCACCAA TGACCAGAAC GATCTGCGTC AGGGCGCCGA AGAGATGCGC TTGCTACTCG GCTTTCTGCA TCCTGAGCAA CGCAAGATTC CCTGGCAAGT AACGGAAACA GTTTCAGCTC ACTCGGTGTA CGAGAACTCT CCCTATGCGG GTCAGACGCG AACCACGCTT TCGGTGTCGC ATGACCACCC AGGCAGCGAT TCGCCGCACG TAGCGCTTGC CGAAAGCGGA ATTCTGCTCG CAACGACGTG GAGCACGATC TTAAGCAATT TCAGTACGGG CGACGACCTC CTGGCCGCGC CGGCGCGCGG CGTCACGAGT TTTCTGAAAA AGCATGCTTC GTTGGAGGCC GCTGCGCGGC TTCGTCCCGA AGCCATCTAT CTTCTCGACA ACTATGTTCA CGACAGCCGT ATCTGGTTCC GCGTGCCGTG GTTTCACGAA TACGCGCCGG GCGGCTACGG GTGGCCGCGC GTCATTTTTA TCGGCGGCAC GCAGCGGATC GCTTACCTGG GCCTCGCGTC CGAATCGGAA CCGCTGAAGG TGGGCAGTAT CCAGCAGGCC GCATGGGCGT AA
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Protein sequence | MSIQWPEEMA DGGRLQPSES DDAFRDGALR MHDETRSCEQ TLHISLFFDG TNNNDDKKNP RRDSLKYCHT NVARLFKAAI EKNSDGLFPF YIPGVGTPLP DIGEKTYLQM GKAMAKGFNA RCLWGFTRVL NAVYETVAPD RTHLLVPVDK AKPLCTAGAD GDMSGFNDLI QILGVTHKDA VDNGDKPRTI KKVWINVIGF SRGAAGARAF VHKLVNEWAP GGNLVKFSGK YAIPYQVNFM GLFDTVASVG PPELTRASVD IGSFDGHFAF ANNGAMRIPN SVRYCVHAFS IHEQRMSFPV DSIRDVGGYP GGVRLEIAYP GVHSDVGGGY APNEQGKGRG SGRGNHDSGK LSQIPLHDMY IHALKYGVPL QSGCDILAQS DTASDFSLSP QTITAFNDWR KTAGPIGSIE DAIKHGMTEM LAWRTLRAKV GTADYVTEQE FFRLAQEDSM TPHKVALDVD RARKTDPEYQ ALANRLSKLL AEKSRLADNR TYPTNTPRIA QLDGQISATR ESMDRRTEAI CGSVGHPEKK DPSPARPGEG PCDVTTNDQN DLRQGAEEMR LLLGFLHPEQ RKIPWQVTET VSAHSVYENS PYAGQTRTTL SVSHDHPGSD SPHVALAESG ILLATTWSTI LSNFSTGDDL LAAPARGVTS FLKKHASLEA AARLRPEAIY LLDNYVHDSR IWFRVPWFHE YAPGGYGWPR VIFIGGTQRI AYLGLASESE PLKVGSIQQA AWA
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