| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0432 |
|---|
| Symbol | |
|---|
| ID | 6283602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 481918 |
|---|
| End bp | 482877 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642619996 |
|---|
| Product | 2-nitropropane dioxygenase NPD |
|---|
| Protein accession | YP_001894081 |
|---|
| Protein GI | 187922439 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGC CCGCCGTCCT GCAAAAACTT GCGCTGCCCG TCGTCGCTTC GCCGATGTTC
ATCGTCAGCT ATCCCGAACT CGTGCTGGCT CAATGCAAGG CCGGGATCGT CGGCTCGTTT
CCCGCGCTGA ACGCCCGCCC GGCTGAACTG CTAGACGAAT GGCTCACGCA GATTCAGGCG
CAACTCGCCG AGCACAAAGC GGCCAATCCC GATGCGGTCA TCGGGCCGAT CGCCGTGAAT
CAAATCGTCC ATCAATCGAA TACGCGGCTC GAACGCGACG TGCGCGTATG CGTCGAACAC
AAGGTGCCGA TTTTCATCAC GAGCCTGCGG GCGCCGGCGC GCGAAATTGT CGATGCCGTG
CATAGCTACG GCGGCATCGT GCTGCATGAC GTGATCAATC TGCGCCATGC GCAGAAGGCG
CTGGAAGCGG GCGTCGACGG TCTGATCCTG GTCGCGTCCG GCGCGGGCGG CCATGCGGGC
ACGACCTCGC CGTTCGCGCT GGTCGGCGAA GTGCGGCGCA TATTCGACGG CCCGATCGTA
CTGTCGGGCT CGATTGCCAA CGGCGGTTCG ATTCTGGCCG CGCAGGCCAT GGGCGCGGAC
CTCGCCTACA TGGGCACGCG CTTCATCGCG ACCAAGGAAG CGCACGCGGT CGACAGCTAC
AAACAGGCGA TCGTCAATTC CACGGCGTCG GACATCATCT ATACGAATCT GTTCACCGGC
GTGCACGGCA ACTACATCCG CGAAAGTATC CTGAACGCCG GACTGGACCC GGACGCGCTG
CCAGAATCGG ACAAGAGCGC GATGAACTTC GGCAGCGACA AGGCGAAGGC GTGGAAAGAC
ATCTGGGGCG CGGGTCAGGG CGTCGGTCTG ATGGACGACG TGCCGAGCGT GGGCGACCTG
GTGCAGCGTT TGACGAAGGA ATATAACGAT GCGAAGGCGC GGCTCGGGAT TGCGCGCTGA
|
|---|
| Protein sequence | MALPAVLQKL ALPVVASPMF IVSYPELVLA QCKAGIVGSF PALNARPAEL LDEWLTQIQA
QLAEHKAANP DAVIGPIAVN QIVHQSNTRL ERDVRVCVEH KVPIFITSLR APAREIVDAV
HSYGGIVLHD VINLRHAQKA LEAGVDGLIL VASGAGGHAG TTSPFALVGE VRRIFDGPIV
LSGSIANGGS ILAAQAMGAD LAYMGTRFIA TKEAHAVDSY KQAIVNSTAS DIIYTNLFTG
VHGNYIRESI LNAGLDPDAL PESDKSAMNF GSDKAKAWKD IWGAGQGVGL MDDVPSVGDL
VQRLTKEYND AKARLGIAR
|
|---|
| |