| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0424 |
|---|
| Symbol | |
|---|
| ID | 6283513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 468044 |
|---|
| End bp | 469327 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642619988 |
|---|
| Product | N-acylglucosamine 2-epimerase |
|---|
| Protein accession | YP_001894073 |
|---|
| Protein GI | 187922431 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.441616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAT CCGATCCGCT TCACCCCGCC AACGGCGCCG CTGCGGCGCC GCCCGTCGAG
AGCTTCCGCT CGCGCGACTT TCTGCTCTCG CATGTGCAGG ACACGCTGCG TTTCTACGCG
CCGAACGTGT TCGACCCGAG CGGCGGCTTT TTCCATTTCT TCCGCGACGA CGGTTCGGTC
TACGACAAAA CCACGCGGCA TCTGGTGAGC AGTTGCCGCT ACGTCTTCAA CTACGCGATG
GCGTATCGCC AGTTCGGCGA CCCGCAGCAT CTGGAATACG CGCGCCACGG CTTGCGATTC
CTGCGCGAAG CGCATTGGGA CGCCCAGCAC GAAGGCTACG ACTGGGAGAT CGAATGGCGC
GACGGCAAGA AGCGCACGCT CGACGCGACG CGCCACTGCT ACGGCCTCGC GTTCGTCCTG
CTCGCCTATT CGCATGCGGC GATGGCCGGC ATCGAAGAAG CCAAGCCGAT GATCGGCGCG
ACCTTCGAGC TGATGGAACA CCGCTTCTGG GACGCCGCCG CTGGCCTCTA CGCCGACGAA
GCGTCGCCCG ACTGGCGGGT TAGTTCGTAC CGCGGCCAGA ACGCGAACAT GCACACCACC
GAGGCGCTGC TGGCCGCGCA CGAAGCGACC CGGCATCTCG TCTATCTGGA TCGCGCCGAG
CGGGTGGCGT CGAATATCAC GCTGCGCCAG GCGAAGCTGT CGCAGGGTCT GGTGTGGGAG
CACTTTCACG CGGACTGGTC GGTCGACTGG CACTACAACG AGGAAGACAG CTCGAACATC
TTCCGGCCGT GGGGCTTCCA GCCTGGGCAT CAAACCGAAT GGGCGAAGCT GCTGCTGATT
CTCGAGCGCT TCCGTCCGTT GCCGTGGCTG CTGCCGCGCG CCATCGAACT GTTCGACGCC
GCCATGGCCC ACGCGTGGGA CGAAGACCAC GGCGGCCTCT ACTACGGCTT CGGCCCCGAC
GGCACCGTGT GCGACCACGA CAAGTATTTC TGGGTCCAGG CGGAAACCTT CGCGACGGCC
GCGCTGCTCG GCAAGCGCAC CGGCAACGAA CGCTTCTGGG ACTGGTACGA CGAGATCTGG
CGCTACAGCT GGGCGCATTT CGTCGATCAC GAGTATGGCG CGTGGTATCG CATCCTCACG
TGCGACAACC GCAAATACAG CGACGAAAAG AGCCCGGCCG GCAAGACCGA CTATCACACC
ATGGGCGCGT GCTACGAAGT ACTGGCCCAC GCGCTGCCCG ACGGGGCCGC CGCTGCGCCC
GAATCCGCGG AGCAAACAAA ATGA
|
|---|
| Protein sequence | MTQSDPLHPA NGAAAAPPVE SFRSRDFLLS HVQDTLRFYA PNVFDPSGGF FHFFRDDGSV
YDKTTRHLVS SCRYVFNYAM AYRQFGDPQH LEYARHGLRF LREAHWDAQH EGYDWEIEWR
DGKKRTLDAT RHCYGLAFVL LAYSHAAMAG IEEAKPMIGA TFELMEHRFW DAAAGLYADE
ASPDWRVSSY RGQNANMHTT EALLAAHEAT RHLVYLDRAE RVASNITLRQ AKLSQGLVWE
HFHADWSVDW HYNEEDSSNI FRPWGFQPGH QTEWAKLLLI LERFRPLPWL LPRAIELFDA
AMAHAWDEDH GGLYYGFGPD GTVCDHDKYF WVQAETFATA ALLGKRTGNE RFWDWYDEIW
RYSWAHFVDH EYGAWYRILT CDNRKYSDEK SPAGKTDYHT MGACYEVLAH ALPDGAAAAP
ESAEQTK
|
|---|
| |