| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0419 |
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| Symbol | |
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| ID | 6284705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 463326 |
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| End bp | 465038 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619983 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_001894068 |
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| Protein GI | 187922426 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.390658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACA GCAAAACCGC ACTCGCCGCC GCCTCTTTCG CGCTGTACAG CCTGCCGTCG
CTTGCCCAGG GCGACGCGTC GCTGATCAAT GTTTTACCGG GCAGTGACAC GCTGCGCGCG
CAACAGCAGC GCCTCGAAGC GACTGCGACC AACGGCACGC TCGGCAACGT GCTGCGCGAG
GACGCGTCGC GTGAGGAAAC CGCCGATCTC GCGCATTTGC CCGTGCAGTC GCCATGCTTC
GAGATCAGCA AAGTCCGGAT TACGAACAAT CCGTTTCGCG CCATCGATCG TCTGGTCGAA
GCGGTCGAGG GCCAGTGCGT CGGCGCCGAC GGCCTGAAGT TCGTCCAGGA CAGCGTCGCC
AACAAGCTCA TCGACTACGG CTACGTCACC ACGCGCGTCA CAGTGCCCGA GCAGTCGCTG
ACGTCGGGCA CTCTGCAGCT CGATGTCGTG CCTGGCCGCA TCGGCGCCAT TCGCAGTGAA
GGCGATACGA TCGGCGATGT CGCTCGTGCT TTGCCGTCGG GCCAAGGCGC TTTGTTGAAC
CAGCGCGCAA TCGATCAGGC GCTGGAAAAC ATCCGGCGAT TGCCGTCGCA GGCGGATGCG
CGGTTCGACA TCGCGCCGGG GCAAGCAGAA GGCGAATCCG ACGTCGTACT GCATGCCGGC
ACCGGACGCC GCTGGCACGT CATGGCCGGC TACGACAACG CGGGCCAGGA TGCCACTGGC
AAGAACGAAC TGTTCGGCGC GCTCTCCATC GATTCGCCGT TCTATCAGTA CGATCAATTG
CAAGTTTCCG GCCTCACGAA CGCGAACCAC GGCGCACCGG GCAAGGGCGC GAATCAGGCG
AGCGCTTCGT ACAGCGTGCC GTTCGGCTAC GCGATGCTCA CCCTCGACGC ATACCGCGCA
AGCTATCTGC AGACGCAGGC GCTGCCGACG GCCGTCGCGC AGTTCACTGG CGAGCAGAAA
GGTGCGGGCA TCAGGCTATC TGGCGTCGTG CAGCGTGGCG CGACATCGCG CACCGAACTG
CGCGCGCGCT TCTATCGCGC GTTGAATCAC AACTACGTGA ACGACACATG GATCGGCGTG
CAGGATCGCG ACGTGTACGG CTACGAAGTC GGCGCATCGC ATCGACATTA TTTCGGGCGT
GTGCAGGTGG ACGCGTCGCT CGGCTGGCGC GACACGCTGC CGGGCATTTC TCGCCAGCCC
GGCTACGTGG TCGGCGACGA CACGTTCAAC GGGCGTGAGC AACTCGAAAC AGCGTCGCTT
ACCGTACAGG CGCCCTTTCA CCTCGCCAAT CAGCCGTTCT CCTACCAATT CATCTGGAAC
AGGCAGAACG CGCGCACACG GGTGACAGCG CCCGACTACT TTACGATCGG TACACGCTAC
GCAGTACGCG GCTTCGACCA ACAAGCGACG CTTGCCGCCG AAGGTGGCTG GACCGTATCG
AACGAACTCG ACTGGTACGC GCCGACGTCC TACGGCGTGC AAGCCTTATA CGCGGGGCTC
GACGCCGGCC GCGTAAACGG GCCGACGACG CGATACCTGG CGGGTAACAC CCTGGTGGGA
ATGGTGGCGG GCGTCAAAGG CAGCCTCGCG CCGAAGAACC GTCTGTCGGC CGGCGTCAAC
TATGACGTCT CTGTCGGCTG GCCGCTCCAT AAGCCGAACG GTTTCCCAAG TCGTTCGCCC
ACCGTGCTTG TGCAGATCAG CACTCTGATC TGA
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| Protein sequence | MQHSKTALAA ASFALYSLPS LAQGDASLIN VLPGSDTLRA QQQRLEATAT NGTLGNVLRE
DASREETADL AHLPVQSPCF EISKVRITNN PFRAIDRLVE AVEGQCVGAD GLKFVQDSVA
NKLIDYGYVT TRVTVPEQSL TSGTLQLDVV PGRIGAIRSE GDTIGDVARA LPSGQGALLN
QRAIDQALEN IRRLPSQADA RFDIAPGQAE GESDVVLHAG TGRRWHVMAG YDNAGQDATG
KNELFGALSI DSPFYQYDQL QVSGLTNANH GAPGKGANQA SASYSVPFGY AMLTLDAYRA
SYLQTQALPT AVAQFTGEQK GAGIRLSGVV QRGATSRTEL RARFYRALNH NYVNDTWIGV
QDRDVYGYEV GASHRHYFGR VQVDASLGWR DTLPGISRQP GYVVGDDTFN GREQLETASL
TVQAPFHLAN QPFSYQFIWN RQNARTRVTA PDYFTIGTRY AVRGFDQQAT LAAEGGWTVS
NELDWYAPTS YGVQALYAGL DAGRVNGPTT RYLAGNTLVG MVAGVKGSLA PKNRLSAGVN
YDVSVGWPLH KPNGFPSRSP TVLVQISTLI
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