Gene Bphyt_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0416 
Symbol 
ID6284702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp456153 
End bp456848 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID642619980 
ProductCutC family protein 
Protein accessionYP_001894065 
Protein GI187922423 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3142] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.378773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCC TCCTTGAAGT CATTGCCACG ACCGTTGCCG ACGCGCGCGT AGCCGCGCAA 
GCCGGCGCCG ATCGTCTCGA ACTTGTCACC GCGATGGGCG AGGGCGGCCT GACGCCGAGC
CTCGGACTGA TCGAAGCGGT GGTGGCGGCG GTCGAGATTC CAGTGAATGT GATCGTGCGG
CCGCATAGCC GCTCGTTCGT GTACGACGCC GACGACTATG CAGTGATGCT GCGTGACGTG
CGCGCGGTGA CAGCGGCGGG CGCGAATGGC ATAGTGATCG GCATGCTGAA TGCCGCGGGG
GAGATCGACC GCGAAGGCCT CGCACGTGCG ATCGATGCAG CGGATGGACT GGCTGTCACC
TTCCATCGCG CGTTCGACGA AGCGCGGGAT TTGCACCGTT CATTGGATGT GCTGCTTGGT
TTCGACGCGG TGACGAACGT GTTGACCTCG GGTGGACAAG CTTCCGTGCT GCACGCGGAA
GACACGATCC GCGAGCTGGT CCAGCAGGCG GCCGATTCGC ATTGCACCGT GCTGGCCGGA
GCCGGTTTGA CGGTCGATGC AATTGCCGGC TTCGTGAGCA GAACACACGT TGAAGCCGTG
CATTTCGGCT CGGGCGTGCG CGTGAACAGC AACGGTCTCG CGCCGGTCGA TTCAGACAAA
GTTGCAGAGG TCCGCGCACT GTTGACGAGC GCATGA
 
Protein sequence
MSVLLEVIAT TVADARVAAQ AGADRLELVT AMGEGGLTPS LGLIEAVVAA VEIPVNVIVR 
PHSRSFVYDA DDYAVMLRDV RAVTAAGANG IVIGMLNAAG EIDREGLARA IDAADGLAVT
FHRAFDEARD LHRSLDVLLG FDAVTNVLTS GGQASVLHAE DTIRELVQQA ADSHCTVLAG
AGLTVDAIAG FVSRTHVEAV HFGSGVRVNS NGLAPVDSDK VAEVRALLTS A